RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA781427", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA781427 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3311166 3311166 PRJNA781427_P_NODE_14763_length_659_cov_7.235495_g13935_i0 PRJNA781427 14763 659 7.235495 47.68191205 Piptocephalis cylindrospora 1907219 Fungi Fungi 242 1.28e-76   NR RKP14406.1 1907219 g13935 i0 58.6 14.8816388467375 203 84 92.4 0 614 6 1 203 RKP14406.1 FtsJ-like methyltransferase-domain-containing protein [Piptocephalis cylindrospora] diamond 9807 242 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Piptocephalis Piptocephalis cylindrospora
19888568 19888568 PRJNA781427_P_NODE_83136_length_247_cov_0.885057_g82252_i0 PRJNA781427 83136 247 0.885057 2.18609079 Kickxella alabastrina 61397 Fungi Fungi 165 2.75e-36   NTclustered gi|2324000536|ref|XM_051537730.1| 61397 g82252 i0 78.926 8.93117408906883 242 51 98 0 1 242 263 22 Kickxella alabastrina 60S ribosomal protein L10-A (BX661DRAFT_192761), partial mRNA blastn 2206 165 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
26895581 26895581 PRJNA781427_P_NODE_6381_length_1104_cov_15.197866_g5832_i0 PRJNA781427 6381 1104 15.197866 167.78444064 Coemansia aciculifera 417176 Fungi Fungi 70.1 3.52e-9   NR KAJ2886950.1 417176 g5832 i0 42.7 0.89945652173913 89 40 24.2 4 331 65 305 382 KAJ2886950.1 hypothetical protein H4R27_000273 [Coemansia aciculifera] diamond 993 70.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia aciculifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;