RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA781427", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA781427 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28001324 28001324 PRJNA781427_P_NODE_31305_length_414_cov_1.354839_g30424_i0 PRJNA781427 31305 414 1.354839 5.60903346 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 115 8.82e-27   NR MCK5014238.1 2035772 g30424 i0 51.1 0.978260869565217 135 66 97.8 0 410 6 158 292 MCK5014238.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 405 115 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28885130 28885130 PRJNA781427_P_NODE_77108_length_250_cov_0.870056_g76224_i0 PRJNA781427 77108 250 0.870056 2.17514 Omnitrophica WOR_2 bacterium RIFOXYB2_FULL_38_16 1801875 Bacteria Bacteria 73.2 7.51e-13   NR OGX59493.1 1801875 g76224 i0 48.1 3.912 81 40 94.8 1 240 4 187 267 OGX59493.1 MAG: hypothetical protein A2306_09625 [Omnitrophica WOR_2 bacterium RIFOXYB2_FULL_38_16] diamond 978 73.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica WOR_2 bacterium RIFOXYB2_FULL_38_16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;