RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA781427", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 1 ✖

tax_clade 1

  • Metamonada · 1 ✖

bioproject 1

  • PRJNA781427 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27094491 27094491 PRJNA781427_P_NODE_60162_length_287_cov_0.962617_g59278_i0 PRJNA781427 60162 287 0.962617 2.76271079 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 78.6 5.04e-15   NR XP_067764319.1 348837 g59278 i0 38.7 18.4703832752613 93 57 97.2 0 283 5 47 139 XP_067764319.1 26S proteasome non-ATPase regulatory subunit [Spironucleus salmonicida] diamond 5301 79 0.994936708860759 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;