RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA781427", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA781427 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28569410 28569410 PRJNA781427_P_NODE_77167_length_250_cov_0.870056_g76283_i0 PRJNA781427 77167 250 0.870056 2.17514 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 153 1.7299999999999994e-42   NR HWX20652.1 2838779 g76283 i0 85.5 0.996 83 12 99.6 0 1 249 376 458 HWX20652.1 hypothetical protein [Candidatus Binatia bacterium] diamond 249 153 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32456606 32456606 PRJNA781427_P_NODE_93899_length_242_cov_0.911243_g93015_i0 PRJNA781427 93899 242 0.911243 2.20520806 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 137 4.51e-37   NR HEV3112826.1 2785449 g93015 i0 87.5 0.991735537190083 80 10 99.2 0 240 1 183 262 HEV3112826.1 HAMP domain-containing sensor histidine kinase [Candidatus Binataceae bacterium] diamond 240 137 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;