RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA781427", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA781427 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27906169 27906169 PRJNA781427_P_NODE_82765_length_247_cov_0.885057_g81881_i0 PRJNA781427 82765 247 0.885057 2.18609079 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 84.3 8.74e-17   NR MBL7082659.1 2052149 g81881 i0 93.3 0.546558704453441 45 3 54.7 0 137 3 1 45 MBL7082659.1 PD40 domain-containing protein [Candidatus Aminicenantes bacterium] diamond 135 84.3 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
29895731 29895731 PRJNA781427_P_NODE_92171_length_243_cov_0.905882_g91287_i0 PRJNA781427 92171 243 0.905882 2.20129326 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 155 4.16e-43   NR NOR52528.1 2052149 g91287 i0 98.8 0.987654320987654 80 1 98.8 0 2 241 308 387 NOR52528.1 MATE family efflux transporter [Candidatus Aminicenantes bacterium] diamond 240 155 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
31254220 31254220 PRJNA781427_P_NODE_81095_length_248_cov_0.880000_g80211_i0 PRJNA781427 81095 248 0.88 2.1824 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 102 4.3799999999999995e-25   NR TEU05847.1 2052149 g80211 i0 98.1 0.641129032258065 53 1 64.1 0 161 3 1 53 TEU05847.1 MAG: hypothetical protein E3I52_05255, partial [Candidatus Aminicenantes bacterium] diamond 159 102 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;