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contig_metadata

25 rows where bioproject = "PRJNA781196" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 25 ✖

tax_clade 1

bioproject 1

  • PRJNA781196 · 25 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2035695 2035695 PRJNA781196_P_NODE_61362_length_246_cov_0.867052_g60985_i0 PRJNA781196 61362 246 0.867052 2.13294792 archaeon 1906665 Archaea Archaea 97.4 3e-24   NR MDP2439593.1 1906665 g60985 i0 70.3 0.902439024390244 74 22 90.2 0 223 2 11 84 MDP2439593.1 hypothetical protein [archaeon] diamond 222 97.4 1 Archaea               archaeon
9687464 9687464 PRJNA781196_P_NODE_17508_length_399_cov_1.331288_g17131_i0 PRJNA781196 17508 399 1.331288 5.31183912 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 208 8.79e-62   NR MBN2228639.1 2053491 g17131 i0 78.1 0.962406015037594 128 28 96.2 0 394 11 383 510 MBN2228639.1 DDE-type integrase/transposase/recombinase [Candidatus Thorarchaeota archaeon] diamond 384 208 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
20337805 20337805 PRJNA781196_P_NODE_6816_length_598_cov_1.714286_g6442_i0 PRJNA781196 6816 598 1.714286 10.25143028 archaeon 1906665 Archaea Archaea 332 1.2099999999999997e-110   NR MDP2436715.1 1906665 g6442 i0 82.3 0.993311036789298 198 34 99.3 1 3 596 106 302 MDP2436715.1 hypothetical protein [archaeon] diamond 594 332 1 Archaea               archaeon
22436630 22436630 PRJNA781196_P_NODE_39558_length_284_cov_1.568720_g39181_i0 PRJNA781196 39558 284 1.56872 4.4551648 archaeon 1906665 Archaea Archaea 143 4.3499999999999997e-39   NR MDP2437063.1 1906665 g39181 i0 70.5 4.94366197183099 95 27 99.3 1 2 283 101 195 MDP2437063.1 hypothetical protein [archaeon] diamond 1404 143 1 Archaea               archaeon
24162842 24162842 PRJNA781196_P_NODE_24619_length_347_cov_1.138686_g24242_i0 PRJNA781196 24619 347 1.138686 3.95124042 archaeon 1906665 Archaea Archaea 174 1.8e-50   NR MDP2436715.1 1906665 g24242 i0 72.2 0.994236311239193 115 31 99.4 1 3 347 178 291 MDP2436715.1 hypothetical protein [archaeon] diamond 345 174 1 Archaea               archaeon
27053618 27053618 PRJNA781196_P_NODE_9302_length_522_cov_1.216036_g8927_i0 PRJNA781196 9302 522 1.216036 6.34770792 archaeon 1906665 Archaea Archaea 45.4 0.0183   NR MDP2436403.1 1906665 g8927 i0 40.7 0.339080459770115 59 32 33.9 1 179 3 6 61 MDP2436403.1 hypothetical protein [archaeon] diamond 177 45.4 1 Archaea               archaeon
27085195 27085195 PRJNA781196_P_NODE_60402_length_246_cov_0.901734_g60025_i0 PRJNA781196 60402 246 0.901734 2.21826564 archaeon 1906665 Archaea Archaea 73.6 3.2e-15   NR RYY87459.1 1906665 g60025 i0 69.4 0.597560975609756 49 15 59.8 0 32 178 3 51 RYY87459.1 MAG: HVA22/TB2/DP1 family protein [archaeon] diamond 147 73.6 1 Archaea               archaeon
27179726 27179726 PRJNA781196_P_NODE_52522_length_251_cov_2.039326_g52145_i0 PRJNA781196 52522 251 2.039326 5.11870826 archaeon 1906665 Archaea Archaea 132 9.11e-38   NR MDP2434118.1 1906665 g52145 i0 77.4 3 84 18 99.2 1 249 1 23 106 MDP2434118.1 30S ribosomal protein S17 [archaeon] diamond 753 132 1 Archaea               archaeon
27653938 27653938 PRJNA781196_P_NODE_42804_length_274_cov_1.164179_g42427_i0 PRJNA781196 42804 274 1.164179 3.18985046 Halorutilus salinus 2487751 Archaea Archaea 57.4 3.76e-7   NR WP_266086963.1 2487751 g42427 i0 35.6 3.03284671532847 90 56 97.4 2 274 8 52 140 WP_266086963.1 DUF4397 domain-containing protein [Halorutilus salinus] diamond 831 57.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halorutilales Halorutilaceae Halorutilus Halorutilus salinus
27811862 27811862 PRJNA781196_P_NODE_6564_length_608_cov_1.166355_g6193_i0 PRJNA781196 6564 608 1.166355 7.0914384 Thermoplasmatales archaeon 2268204 Archaea Archaea 125 2.5699999999999997e-30   NR UCF13766.1 2268204 g6193 i0 38.9 1.04111842105263 211 103 95.2 6 3 581 57 259 UCF13766.1 MAG: serpin family protein [Thermoplasmatales archaeon] diamond 633 125 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
28421132 28421132 PRJNA781196_P_NODE_44346_length_269_cov_1.193878_g43969_i0 PRJNA781196 44346 269 1.193878 3.21153182 Methanobacteriati 3366610 Archaea Archaea 135 5.7e-37   NR NDB64457.1 2026739 g43969 i0 69.7 6.94795539033457 89 27 99.3 0 267 1 89 177 NDB64457.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Methanobacteriota archaeon] diamond 1869 135 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28443317 28443317 PRJNA781196_P_NODE_53206_length_251_cov_0.876404_g52829_i0 PRJNA781196 53206 251 0.876404 2.19977404 archaeon 1906665 Archaea Archaea 95.9 8.06e-22   NR MDP2437799.1 1906665 g52829 i0 63.8 0.956175298804781 80 29 95.6 0 2 241 171 250 MDP2437799.1 hypothetical protein [archaeon] diamond 240 95.9 1 Archaea               archaeon
28768158 28768158 PRJNA781196_P_NODE_13787_length_441_cov_2.065217_g13410_i0 PRJNA781196 13787 441 2.065217 9.10760697 root 1 Root_unresolved Root_unresolved 99 7.550000000000001e-21   NR MCK5217385.1 2250255 g13410 i0 52.8 1.61224489795918 123 55 83 3 74 439 388 508 MCK5217385.1 PKD domain-containing protein [Methanosarcinales archaeon] diamond 711 99.4 0.995975855130785 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
28980042 28980042 PRJNA781196_P_NODE_16588_length_408_cov_1.164179_g16211_i0 PRJNA781196 16588 408 1.164179 4.74985032 Nitrososphaerota archaeon 2026795 Archaea Archaea 60.1 2.07e-7   NR MDG6921989.1 2026795 g16211 i0 31.9 0.830882352941177 113 64 75.7 3 316 8 501 610 MDG6921989.1 hypothetical protein [Nitrososphaerota archaeon] diamond 339 60.1 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
29011791 29011791 PRJNA781196_P_NODE_43068_length_273_cov_1.215000_g42691_i0 PRJNA781196 43068 273 1.215 3.31695 Methanospirillum sp. 45200 Archaea Archaea 44.7 0.00941   NR HWQ67247.1 45200 g42691 i0 50.8 0.648351648351648 59 20 62.6 2 50 220 184 235 HWQ67247.1 hypothetical protein [Methanospirillum sp.] diamond 177 44.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum sp.
29021168 29021168 PRJNA781196_P_NODE_62388_length_245_cov_0.906977_g62011_i0 PRJNA781196 62388 245 0.906977 2.22209365 root 1 Root_unresolved Root_unresolved 55.8 8.28e-7   NR MFA5764489.1 1906665 g62011 i0 57.5 1.43265306122449 40 15 49 1 168 49 229 266 MFA5764489.1 hypothetical protein [archaeon] diamond 351 56.2 0.99288256227758 Archaea               archaeon
29115657 29115657 PRJNA781196_P_NODE_59168_length_247_cov_0.896552_g58791_i0 PRJNA781196 59168 247 0.896552 2.21448344 root 1 Root_unresolved Root_unresolved 63.2 2.51e-9   NR RAH14746.1 2026739 g58791 i0 57.1 1.20242914979757 49 21 59.5 0 245 99 240 288 RAH14746.1 MAG: hypothetical protein CMB56_004690 [Methanobacteriota archaeon] diamond 297 63.2 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29737430 29737430 PRJNA781196_P_NODE_8990_length_529_cov_1.236842_g8615_i0 PRJNA781196 8990 529 1.236842 6.54289418 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 57.4 6.31e-7   NR MBN2477751.1 2250274 g8615 i0 40.7 1.93383742911153 81 42 45.9 1 528 286 52 126 MBN2477751.1 ankyrin repeat domain-containing protein [Candidatus Micrarchaeota archaeon] diamond 1023 57.4 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
29895673 29895673 PRJNA781196_P_NODE_63371_length_244_cov_0.912281_g62994_i0 PRJNA781196 63371 244 0.912281 2.22596564 archaeon 1906665 Archaea Archaea 64.7 1.19e-11   NR RYG56852.1 1906665 g62994 i0 49.3 0.872950819672131 71 36 87.3 0 15 227 1 71 RYG56852.1 MAG: hypothetical protein EON66_01850 [archaeon] diamond 213 64.7 1 Archaea               archaeon
30401545 30401545 PRJNA781196_P_NODE_53533_length_251_cov_0.876404_g53156_i0 PRJNA781196 53533 251 0.876404 2.19977404 archaeon 1906665 Archaea Archaea 101 1.28e-25   NR MDP2434962.1 1906665 g53156 i0 57.5 1.91235059760956 80 34 95.6 0 241 2 37 116 MDP2434962.1 hypothetical protein [archaeon] diamond 480 101 1 Archaea               archaeon
30811772 30811772 PRJNA781196_P_NODE_57534_length_248_cov_0.891429_g57157_i0 PRJNA781196 57534 248 0.891429 2.21074392 archaeon 1906665 Archaea Archaea 58.9 7.66e-8   NR MDP2436570.1 1906665 g57157 i0 30 1.93548387096774 160 29 93.1 4 15 245 74 233 MDP2436570.1 alpha/beta hydrolase [archaeon] diamond 480 58.9 1 Archaea               archaeon
30938346 30938346 PRJNA781196_P_NODE_45894_length_264_cov_1.633508_g45517_i0 PRJNA781196 45894 264 1.633508 4.31246112 archaeon 1906665 Archaea Archaea 107 3.81e-27   NR MDP2438646.1 1906665 g45517 i0 64.1 1.04545454545455 92 27 98.9 2 2 262 89 179 MDP2438646.1 Rab family GTPase [archaeon] diamond 276 107 1 Archaea               archaeon
31539032 31539032 PRJNA781196_P_NODE_55376_length_250_cov_0.881356_g54999_i0 PRJNA781196 55376 250 0.881356 2.20339 Nitrososphaerota archaeon 2026795 Archaea Archaea 60.8 1.31e-8   NR RZD32614.1 2026795 g54999 i0 41.8 3.36 67 36 80.4 1 241 41 66 129 RZD32614.1 MAG: hypothetical protein CXT79_05995 [Nitrososphaerota archaeon] diamond 840 60.8 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
32708717 32708717 PRJNA781196_P_NODE_63760_length_244_cov_0.912281_g63383_i0 PRJNA781196 63760 244 0.912281 2.22596564 Methanobacteriota archaeon 2026739 Archaea Archaea 93.2 6.71e-20   NR HDH27971.1 2026739 g63383 i0 59.2 1.74590163934426 71 29 87.3 0 240 28 428 498 HDH27971.1 calcium-transporting P-type ATPase, PMR1-type [Methanobacteriota archaeon] diamond 426 93.2 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
32803150 32803150 PRJNA781196_P_NODE_40180_length_282_cov_1.866029_g39803_i0 PRJNA781196 40180 282 1.866029 5.26220178 Salinirussus sp. 2036002 Archaea Archaea 48.1 7.34e-4   NR MFB6297149.1 2036002 g39803 i0 33.3 0.861702127659574 81 46 77.7 1 46 264 150 230 MFB6297149.1 diaminopimelate decarboxylase [Salinirussus sp.] diamond 243 48.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Salinirussus Salinirussus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;