contig_metadata
11 rows where bioproject = "PRJNA781196" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 759289 | 759289 | PRJNA781196_P_NODE_40261_length_282_cov_1.492823_g39884_i0 | PRJNA781196 | 40261 | 282 | 1.492823 | 4.20976086 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 514 | 2.76e-141 | NTclustered | gi|164510704|emb|AJ966883.1| | 48466 | g39884 | i0 | 99.644 | 259.617021276596 | 281 | 1 | 99 | 0 | 2 | 282 | 4722 | 4442 | Prosthecobacter vanneervenii 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 12252 | blastn | 73212 | 514 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 2035312 | 2035312 | PRJNA781196_P_NODE_38122_length_289_cov_1.083333_g37745_i0 | PRJNA781196 | 38122 | 289 | 1.083333 | 3.13083237 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 462 | 1.04e-125 | NTclustered | gi|2813917447|gb|CP170506.1| | 2811408 | g37745 | i0 | 95.517 | 142.826989619377 | 290 | 12 | 100 | 1 | 1 | 289 | 3046326 | 3046615 | MAG: Chthoniobacteraceae bacterium isolate SH-KS-3 chromosome, complete genome | blastn | 41277 | 462 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 4587880 | 4587880 | PRJNA781196_P_NODE_58104_length_248_cov_0.891429_g57727_i0 | PRJNA781196 | 58104 | 248 | 0.891429 | 2.21074392 | Chthoniobacter flavus | 191863 | Bacteria | Bacteria | 368 | 1.96e-97 | NTclustered | gi|183579828|emb|AM905425.1| | 497964 | g57727 | i0 | 95.279 | 270.915322580645 | 233 | 10 | 94 | 1 | 1 | 233 | 2418 | 2187 | Chthoniobacter flavus 23S rRNA gene, strain Ellin428 | blastn | 67187 | 368 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter flavus | |
| 19886487 | 19886487 | PRJNA781196_P_NODE_59996_length_246_cov_1.676301_g59619_i0 | PRJNA781196 | 59996 | 246 | 1.676301 | 4.12370046 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 438 | 1.4599999999999996e-118 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g59619 | i0 | 98.78 | 98.7845528455285 | 246 | 3 | 100 | 0 | 1 | 246 | 869 | 624 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 24301 | 438 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 27780229 | 27780229 | PRJNA781196_P_NODE_63484_length_244_cov_0.912281_g63107_i0 | PRJNA781196 | 63484 | 244 | 0.912281 | 2.22596564 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 77.4 | 2.33e-14 | NR | MDA7930803.1 | 2562705 | g63107 | i0 | 50.6 | 8.11475409836066 | 77 | 37 | 94.7 | 1 | 3 | 233 | 22 | 97 | MDA7930803.1 ubiquitin-like protein [Akkermansiaceae bacterium] | diamond | 1980 | 77.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 29011771 | 29011771 | PRJNA781196_P_NODE_25288_length_343_cov_1.722222_g24911_i0 | PRJNA781196 | 25288 | 343 | 1.722222 | 5.90722146 | Phragmitibacter flavus | 2576071 | Bacteria | Bacteria | 48.1 | 0.00139 | NR | WP_138088455.1 | 2576071 | g24911 | i0 | 29.9 | 1.02332361516035 | 117 | 63 | 97.1 | 3 | 337 | 5 | 3 | 106 | WP_138088455.1 hypothetical protein [Phragmitibacter flavus] | diamond | 351 | 48.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Phragmitibacter | Phragmitibacter flavus | |
| 29295609 | 29295609 | PRJNA781196_P_NODE_45969_length_264_cov_1.528796_g45592_i0 | PRJNA781196 | 45969 | 264 | 1.528796 | 4.03602144 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 83.6 | 3.71e-17 | NR | HEX9784778.1 | 2006848 | g45592 | i0 | 70.5 | 0.693181818181818 | 61 | 18 | 69.3 | 0 | 185 | 3 | 1 | 61 | HEX9784778.1 pantoate--beta-alanine ligase [Opitutaceae bacterium] | diamond | 183 | 83.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 29958746 | 29958746 | PRJNA781196_P_NODE_6591_length_607_cov_1.215356_g6220_i0 | PRJNA781196 | 6591 | 607 | 1.215356 | 7.37721092 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 92.4 | 9.35e-18 | NR | MCU0772034.1 | 2026799 | g6220 | i0 | 36.1 | 0.958813838550247 | 194 | 102 | 95.4 | 8 | 17 | 595 | 526 | 698 | MCU0772034.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 582 | 92.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31412342 | 31412342 | PRJNA781196_P_NODE_12776_length_456_cov_1.629243_g12399_i0 | PRJNA781196 | 12776 | 456 | 1.629243 | 7.42934808 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 83.2 | 2.87e-15 | NR | PYJ08782.1 | 2026799 | g12399 | i0 | 42.4 | 1.98026315789474 | 139 | 69 | 89.5 | 3 | 452 | 45 | 156 | 286 | PYJ08782.1 MAG: hypothetical protein DME25_00550 [Verrucomicrobiota bacterium] | diamond | 903 | 83.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32235192 | 32235192 | PRJNA781196_P_NODE_59358_length_247_cov_0.896552_g58981_i0 | PRJNA781196 | 59358 | 247 | 0.896552 | 2.21448344 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 99.4 | 4.22e-22 | NR | HAB15996.1 | 2026801 | g58981 | i0 | 77.6 | 1.44534412955466 | 58 | 13 | 70.4 | 0 | 1 | 174 | 481 | 538 | HAB15996.1 hypothetical protein [Verrucomicrobiales bacterium] | diamond | 357 | 99.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 32708713 | 32708713 | PRJNA781196_P_NODE_62000_length_245_cov_0.906977_g61623_i0 | PRJNA781196 | 62000 | 245 | 0.906977 | 2.22209365 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 132 | 2.57e-35 | NR | MES2595503.1 | 2026799 | g61623 | i0 | 81.5 | 1.98367346938776 | 81 | 15 | 99.2 | 0 | 1 | 243 | 9 | 89 | MES2595503.1 ABC transporter substrate-binding protein [Verrucomicrobiota bacterium] | diamond | 486 | 132 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;