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contig_metadata

13 rows where bioproject = "PRJNA781196", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 13 ✖

tax_phylum 1

  • Bdellovibrionota · 13 ✖

tax_kingdom 1

bioproject 1

  • PRJNA781196 · 13 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10963708 10963708 PRJNA781196_P_NODE_56349_length_249_cov_0.886364_g55972_i0 PRJNA781196 56349 249 0.886364 2.20704636 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 120 3.5099999999999993e-31   NR MCB0370750.1 2053517 g55972 i0 73.2 0.987951807228916 82 20 98.8 1 247 2 116 195 MCB0370750.1 inositol-3-phosphate synthase [Bdellovibrionales bacterium] diamond 246 120 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
17337366 17337366 PRJNA781196_P_NODE_26754_length_335_cov_1.786260_g26377_i0 PRJNA781196 26754 335 1.78626 5.983971 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 194 5.35e-58   NR MCB0368368.1 2053517 g26377 i0 87.3 0.985074626865672 110 14 98.5 0 330 1 164 273 MCB0368368.1 hypothetical protein [Bdellovibrionales bacterium] diamond 330 194 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
23712029 23712029 PRJNA781196_P_NODE_31559_length_313_cov_1.416667_g31182_i0 PRJNA781196 31559 313 1.416667 4.43416771 Bacteria 2 Bacteria Bacteria 173 3.08e-50   NR WP_102242450.1 960 g31182 i0 85.6 38.8753993610224 97 14 93 0 291 1 2 98 WP_102242450.1 isocitrate dehydrogenase (NADP(+)) [Bacteriovorax stolpii] diamond 12168 173 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax stolpii
23712505 23712505 PRJNA781196_P_NODE_62219_length_245_cov_0.906977_g61842_i0 PRJNA781196 62219 245 0.906977 2.22209365 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 147 6.63e-39   NR MES3036873.1 3034175 g61842 i0 80.2 3.96734693877551 81 16 99.2 0 3 245 78 158 MES3036873.1 aconitate hydratase [Bdellovibrionota bacterium] diamond 972 147 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
27157355 27157355 PRJNA781196_P_NODE_11422_length_479_cov_1.034483_g11046_i0 PRJNA781196 11422 479 1.034483 4.95517357 Pseudomonadati 3379134 Bacteria Bacteria 145 1.84e-41   NR GJL85093.1 2024841 g11046 i0 58.1 4.84133611691023 124 51 77 1 371 3 4 127 GJL85093.1 MAG: group 1 truncated hemoglobin [Micavibrio sp.] diamond 2319 146 0.993150684931507 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
27306467 27306467 PRJNA781196_P_NODE_12823_length_455_cov_2.861257_g12446_i0 PRJNA781196 12823 455 2.861257 13.01871935 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 120 3.5e-28   NR MEZ4704431.1 3034175 g12446 i0 45.7 0.995604395604396 151 71 99.6 4 2 454 408 547 MEZ4704431.1 hypothetical protein [Bdellovibrionota bacterium] diamond 453 120 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
27748759 27748759 PRJNA781196_P_NODE_52044_length_252_cov_0.871508_g51667_i0 PRJNA781196 52044 252 0.871508 2.19620016 Micavibrio sp. 2024841 Bacteria Bacteria 48.9 2.58e-4   NR MAS86452.1 2024841 g51667 i0 49 1.5952380952381 51 22 60.7 1 238 86 138 184 MAS86452.1 RNA pseudouridine synthase [Micavibrio sp.] diamond 402 48.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
27938051 27938051 PRJNA781196_P_NODE_50065_length_253_cov_0.866667_g49688_i0 PRJNA781196 50065 253 0.866667 2.19266751 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 96.3 6.559999999999999e-23   NR MBP9675022.1 2081706 g49688 i0 82.5 0.675889328063241 57 10 67.6 0 171 1 27 83 MBP9675022.1 EF-hand domain-containing protein [Bacteriovoracaceae bacterium] diamond 171 96.3 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
29210426 29210426 PRJNA781196_P_NODE_42329_length_275_cov_1.544554_g41952_i0 PRJNA781196 42329 275 1.544554 4.2475235 Pseudomonadati 3379134 Bacteria Bacteria 68.2 5.83e-11   NR MCB0326472.1 2053517 g41952 i0 60.4 2.22545454545455 53 20 56.7 1 118 273 190 242 MCB0326472.1 hypothetical protein [Bdellovibrionales bacterium] diamond 612 68.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30274932 30274932 PRJNA781196_P_NODE_24552_length_347_cov_1.609489_g24175_i0 PRJNA781196 24552 347 1.609489 5.58492683 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 104 2.3299999999999994e-23   NR MCM2348460.1 2081706 g24175 i0 44.1 1.92795389048991 111 61 96 1 345 13 972 1081 MCM2348460.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 669 104 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
31507434 31507434 PRJNA781196_P_NODE_40016_length_283_cov_1.152381_g39639_i0 PRJNA781196 40016 283 1.152381 3.26123823 Pseudobacteriovorax sp. 2020859 Bacteria Bacteria 57.4 3.25e-7   NR NRA68171.1 2020859 g39639 i0 38.8 0.848056537102474 80 41 84.8 1 281 42 216 287 NRA68171.1 alpha/beta hydrolase [Pseudobacteriovorax sp.] diamond 240 57.4 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Pseudobacteriovoracaceae Pseudobacteriovorax Pseudobacteriovorax sp.
31539022 31539022 PRJNA781196_P_NODE_45696_length_265_cov_1.218750_g45319_i0 PRJNA781196 45696 265 1.21875 3.2296875 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 132 4.77e-36   NR MCB0368225.1 2053517 g45319 i0 72.4 0.984905660377358 87 24 98.5 0 261 1 34 120 MCB0368225.1 HAD family hydrolase [Bdellovibrionales bacterium] diamond 261 132 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32529215 32529215 PRJNA781196_P_NODE_54059_length_250_cov_1.762712_g53682_i0 PRJNA781196 54059 250 1.762712 4.40678 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 114 3.69e-27   NR MFN8943610.1 2026715 g53682 i0 70.4 6.936 81 24 97.2 0 2 244 128 208 MFN8943610.1 pyruvate, phosphate dikinase [Pseudobdellovibrionaceae bacterium] diamond 1734 115 0.991304347826087 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;