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contig_metadata

8 rows where bioproject = "PRJNA781196" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA781196 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27653938 27653938 PRJNA781196_P_NODE_42804_length_274_cov_1.164179_g42427_i0 PRJNA781196 42804 274 1.164179 3.18985046 Halorutilus salinus 2487751 Archaea Archaea 57.4 3.76e-7   NR WP_266086963.1 2487751 g42427 i0 35.6 3.03284671532847 90 56 97.4 2 274 8 52 140 WP_266086963.1 DUF4397 domain-containing protein [Halorutilus salinus] diamond 831 57.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halorutilales Halorutilaceae Halorutilus Halorutilus salinus
27811862 27811862 PRJNA781196_P_NODE_6564_length_608_cov_1.166355_g6193_i0 PRJNA781196 6564 608 1.166355 7.0914384 Thermoplasmatales archaeon 2268204 Archaea Archaea 125 2.5699999999999997e-30   NR UCF13766.1 2268204 g6193 i0 38.9 1.04111842105263 211 103 95.2 6 3 581 57 259 UCF13766.1 MAG: serpin family protein [Thermoplasmatales archaeon] diamond 633 125 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
28421132 28421132 PRJNA781196_P_NODE_44346_length_269_cov_1.193878_g43969_i0 PRJNA781196 44346 269 1.193878 3.21153182 Methanobacteriati 3366610 Archaea Archaea 135 5.7e-37   NR NDB64457.1 2026739 g43969 i0 69.7 6.94795539033457 89 27 99.3 0 267 1 89 177 NDB64457.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Methanobacteriota archaeon] diamond 1869 135 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28768158 28768158 PRJNA781196_P_NODE_13787_length_441_cov_2.065217_g13410_i0 PRJNA781196 13787 441 2.065217 9.10760697 root 1 Root_unresolved Root_unresolved 99 7.550000000000001e-21   NR MCK5217385.1 2250255 g13410 i0 52.8 1.61224489795918 123 55 83 3 74 439 388 508 MCK5217385.1 PKD domain-containing protein [Methanosarcinales archaeon] diamond 711 99.4 0.995975855130785 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
29011791 29011791 PRJNA781196_P_NODE_43068_length_273_cov_1.215000_g42691_i0 PRJNA781196 43068 273 1.215 3.31695 Methanospirillum sp. 45200 Archaea Archaea 44.7 0.00941   NR HWQ67247.1 45200 g42691 i0 50.8 0.648351648351648 59 20 62.6 2 50 220 184 235 HWQ67247.1 hypothetical protein [Methanospirillum sp.] diamond 177 44.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum sp.
29115657 29115657 PRJNA781196_P_NODE_59168_length_247_cov_0.896552_g58791_i0 PRJNA781196 59168 247 0.896552 2.21448344 root 1 Root_unresolved Root_unresolved 63.2 2.51e-9   NR RAH14746.1 2026739 g58791 i0 57.1 1.20242914979757 49 21 59.5 0 245 99 240 288 RAH14746.1 MAG: hypothetical protein CMB56_004690 [Methanobacteriota archaeon] diamond 297 63.2 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
32708717 32708717 PRJNA781196_P_NODE_63760_length_244_cov_0.912281_g63383_i0 PRJNA781196 63760 244 0.912281 2.22596564 Methanobacteriota archaeon 2026739 Archaea Archaea 93.2 6.71e-20   NR HDH27971.1 2026739 g63383 i0 59.2 1.74590163934426 71 29 87.3 0 240 28 428 498 HDH27971.1 calcium-transporting P-type ATPase, PMR1-type [Methanobacteriota archaeon] diamond 426 93.2 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
32803150 32803150 PRJNA781196_P_NODE_40180_length_282_cov_1.866029_g39803_i0 PRJNA781196 40180 282 1.866029 5.26220178 Salinirussus sp. 2036002 Archaea Archaea 48.1 7.34e-4   NR MFB6297149.1 2036002 g39803 i0 33.3 0.861702127659574 81 46 77.7 1 46 264 150 230 MFB6297149.1 diaminopimelate decarboxylase [Salinirussus sp.] diamond 243 48.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Salinirussus Salinirussus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;