RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA781196", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA781196 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26864022 26864022 PRJNA781196_P_NODE_58681_length_247_cov_1.304598_g58304_i0 PRJNA781196 58681 247 1.304598 3.22235706 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 43.5 0.0218   NR HVA85453.1 2973664 g58304 i0 38.3 0.728744939271255 60 37 72.9 0 190 11 1127 1186 HVA85453.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 180 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
29011801 29011801 PRJNA781196_P_NODE_53808_length_251_cov_0.876404_g53431_i0 PRJNA781196 53808 251 0.876404 2.19977404 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 114 2.8499999999999993e-28   NR MDB5165335.1 2026720 g53431 i0 77.1 0.99203187250996006 83 19 99.2 0 251 3 65 147 MDB5165335.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 249 114 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31222341 31222341 PRJNA781196_P_NODE_40595_length_281_cov_1.500000_g40218_i0 PRJNA781196 40595 281 1.5 4.215 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 55.5 3.37e-7   NR MCA9332768.1 2026720 g40218 i0 36.9 0.693950177935943 65 40 69.4 1 195 1 27 90 MCA9332768.1 peptide-methionine (R)-S-oxide reductase MsrB [Candidatus Saccharibacteria bacterium] diamond 195 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;