RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJNA781196" and tax_clade = "Bacteria candidate phyla"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 8 ✖

bioproject 1

  • PRJNA781196 · 8 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26864022 26864022 PRJNA781196_P_NODE_58681_length_247_cov_1.304598_g58304_i0 PRJNA781196 58681 247 1.304598 3.22235706 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 43.5 0.0218   NR HVA85453.1 2973664 g58304 i0 38.3 0.728744939271255 60 37 72.9 0 190 11 1127 1186 HVA85453.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 180 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27590853 27590853 PRJNA781196_P_NODE_57684_length_248_cov_0.891429_g57307_i0 PRJNA781196 57684 248 0.891429 2.21074392 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 61.2 1e-8   NR MBP1769602.1 2052149 g57307 i0 47.1 0.846774193548387 70 36 83.5 1 35 241 209 278 MBP1769602.1 alcohol dehydrogenase [Candidatus Aminicenantes bacterium] diamond 210 61.2 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
29011795 29011795 PRJNA781196_P_NODE_46208_length_263_cov_1.715789_g45831_i0 PRJNA781196 46208 263 1.715789 4.51252507 Patescibacteria group bacterium 2052139 Bacteria Bacteria 43.1 0.0161   NR MFA5953941.1 2052139 g45831 i0 32.6 1.01520912547529 89 51 94.7 2 252 4 11 96 MFA5953941.1 30S ribosomal protein S8 [Patescibacteria group bacterium] diamond 267 43.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29011801 29011801 PRJNA781196_P_NODE_53808_length_251_cov_0.876404_g53431_i0 PRJNA781196 53808 251 0.876404 2.19977404 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 114 2.8499999999999993e-28   NR MDB5165335.1 2026720 g53431 i0 77.1 0.99203187250996006 83 19 99.2 0 251 3 65 147 MDB5165335.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 249 114 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29484797 29484797 PRJNA781196_P_NODE_55910_length_249_cov_0.886364_g55533_i0 PRJNA781196 55910 249 0.886364 2.20704636 candidate division TM6 bacterium GW2 95901 Bacteria Bacteria 97.8 6.649999999999999e-23   NR KKP26315.1 1619073 g55533 i0 62.3 4.51807228915663 69 25 81.9 1 44 247 97 165 KKP26315.1 MAG: Mn Superoxide dismutase [candidate division TM6 bacterium GW2011_GWE2_31_21] diamond 1125 97.8 1 Bacteria Bacteria candidate phyla             candidate division TM6 bacterium GW2011_GWE2_31_21
30401539 30401539 PRJNA781196_P_NODE_46473_length_263_cov_0.731579_g46096_i0 PRJNA781196 46473 263 0.731579 1.92405277 Candidatus Magasanikiibacteriota bacterium 2026717 Bacteria Bacteria 42.7 0.046   NR MBT4121096.1 2026717 g46096 i0 31.3 0.76425855513308 67 44 74.1 1 16 210 123 189 MBT4121096.1 hypothetical protein [Candidatus Magasanikiibacteriota bacterium] diamond 201 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikiibacteriota bacterium
31064842 31064842 PRJNA781196_P_NODE_65755_length_243_cov_0.917647_g65378_i0 PRJNA781196 65755 243 0.917647 2.22988221 Candidatus Woesebacteria bacterium RIFCSPLOWO2_ 2026804 Bacteria Bacteria 79.7 3.75e-15   NR OGM70984.1 1802526 g65378 i0 63.3 0.740740740740741 60 22 74.1 0 204 25 1 60 OGM70984.1 MAG: hypothetical protein A2897_00370, partial [Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_44_24b] diamond 180 79.7 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_44_24b
31222341 31222341 PRJNA781196_P_NODE_40595_length_281_cov_1.500000_g40218_i0 PRJNA781196 40595 281 1.5 4.215 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 55.5 3.37e-7   NR MCA9332768.1 2026720 g40218 i0 36.9 0.693950177935943 65 40 69.4 1 195 1 27 90 MCA9332768.1 peptide-methionine (R)-S-oxide reductase MsrB [Candidatus Saccharibacteria bacterium] diamond 195 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;