RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA781196", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA781196 · 4 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27274793 27274793 PRJNA781196_P_NODE_12723_length_457_cov_1.317708_g12346_i0 PRJNA781196 12723 457 1.317708 6.02192556 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 59.3 6.6e-7   NR XP_013757898.1 461836 g12346 i0 36.3 0.814004376367615 124 63 80.1 7 89 454 3046 3155 XP_013757898.1 uncharacterized protein AMSG_05495 [Thecamonas trahens ATCC 50062] diamond 372 59.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29232598 29232598 PRJNA781196_P_NODE_45589_length_265_cov_1.625000_g45212_i0 PRJNA781196 45589 265 1.625 4.30625 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 91.7 8.45e-22   NR XP_013760378.1 461836 g45212 i0 52.4 0.950943396226415 84 40 95.1 0 264 13 11 94 XP_013760378.1 uncharacterized protein AMSG_03040 [Thecamonas trahens ATCC 50062] diamond 252 91.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29715129 29715129 PRJNA781196_P_NODE_61490_length_245_cov_1.802326_g61113_i0 PRJNA781196 61490 245 1.802326 4.4156987 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.5 1.25e-15   NR XP_013758005.1 461836 g61113 i0 67.9 4.61632653061224 53 17 64.9 0 217 59 61 113 XP_013758005.1 uncharacterized protein AMSG_05289 [Thecamonas trahens ATCC 50062] diamond 1131 81.3 0.990159901599016 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31285731 31285731 PRJNA781196_P_NODE_75_length_3159_cov_2.899222_g56_i0 PRJNA781196 75 3159 2.899222 91.58642298 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 55.1 0.00286   NR XP_013757898.1 461836 g56 i0 29.1 0.120607787274454 127 83 11.9 5 656 282 3072 3193 XP_013757898.1 uncharacterized protein AMSG_05495 [Thecamonas trahens ATCC 50062] diamond 381 55.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;