RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA774958" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA774958 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3303681 3303681 PRJNA774958_P_NODE_19903_length_358_cov_2.017544_g19656_i0 PRJNA774958 19903 358 2.017544 7.22280752 Mycoplasma phocoeninasale 2726117 Bacteria Bacteria 54.7 0.009   NTclustered gi|1836057661|gb|CP051480.1| 2726117 g19656 i0 87.5 0.134078212290503 48 4 13 2 106 153 133690 133645 Mycoplasma phocoeninasale strain C264-NAS chromosome, complete genome blastn 48 54.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma phocoeninasale
30031333 30031333 PRJNA774958_P_NODE_10991_length_492_cov_1.599045_g10745_i0 PRJNA774958 10991 492 1.599045 7.8673014 Spiroplasma 2132 Bacteria Bacteria 46.6 0.0145   NR WP_040093749.1 2138 g10745 i0 25.9 1.92682926829268 158 87 88.4 5 483 49 45 185 WP_040093749.1 hypothetical protein [Spiroplasma poulsonii] diamond 948 46.6 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma poulsonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;