RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA774958" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA774958 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27631663 27631663 PRJNA774958_P_NODE_36304_length_246_cov_0.890173_g36057_i0 PRJNA774958 36304 246 0.890173 2.18982558 Bacteria 2 Bacteria Bacteria 89.4 7.46e-19   NR HMN63026.1 1872519 g36057 i0 51.9 3.95121951219512 81 39 98.8 0 246 4 218 298 HMN63026.1 M20/M25/M40 family metallo-hydrolase [Anaerolinea sp.] diamond 972 89.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Anaerolinea Anaerolinea sp.
30338198 30338198 PRJNA774958_P_NODE_16372_length_401_cov_1.368902_g16125_i0 PRJNA774958 16372 401 1.368902 5.48929702 Candidatus Flexifilum breve 3140694 Bacteria Bacteria 47 0.00635   NR WP_343421316.1 3140694 g16125 i0 33.3 0.538653366583541 72 44 51.6 2 280 74 84 154 WP_343421316.1 hypothetical protein [Candidatus Flexifilum breve] diamond 216 47 1 Bacteria   Bacillati Chloroflexota Anaerolineae Aggregatilineales Candidatus Flexifilaceae Candidatus Flexifilum Candidatus Flexifilum breve

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;