contig_metadata
15 rows where bioproject = "PRJNA774958" and tax_phylum = "Bacteroidota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 752720 | 752720 | PRJNA774958_P_NODE_31041_length_265_cov_1.604167_g30794_i0 | PRJNA774958 | 31041 | 265 | 1.604167 | 4.25104255 | Spirosoma taeanense | 2735870 | Bacteria | Bacteria | 285 | 2.19e-72 | NTclustered | gi|1843765704|gb|CP053435.1| | 2735870 | g30794 | i0 | 86.923 | 202.041509433962 | 260 | 27 | 97 | 7 | 1 | 257 | 5430504 | 5430759 | Spirosoma taeanense strain TS118 chromosome, complete genome | blastn | 53541 | 285 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cytophagaceae | Spirosoma | Spirosoma taeanense | |
| 21155260 | 21155260 | PRJNA774958_P_NODE_28137_length_286_cov_0.854460_g27890_i0 | PRJNA774958 | 28137 | 286 | 0.85446 | 2.4437556 | Elizabethkingia anophelis | 1117645 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|1154263508|gb|CP014339.1| | 1117645 | g27890 | i0 | 100 | 0.0979020979020979 | 28 | 0 | 10 | 0 | 10 | 37 | 1965726 | 1965753 | Elizabethkingia anophelis strain E6809 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Elizabethkingia | Elizabethkingia anophelis | |
| 23705445 | 23705445 | PRJNA774958_P_NODE_1559_length_1209_cov_2.302817_g1434_i0 | PRJNA774958 | 1559 | 1209 | 2.302817 | 27.84105753 | Sphingobacteriia bacterium | 2035813 | Bacteria | Bacteria | 550 | 3.65e-192 | NR | MBN8828671.1 | 2035813 | g1434 | i0 | 70.7 | 15.2109181141439 | 382 | 112 | 94.8 | 0 | 52 | 1197 | 79 | 460 | MBN8828671.1 class II fumarate hydratase [Sphingobacteriia bacterium] | diamond | 18390 | 550 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriia bacterium | ||||
| 23705552 | 23705552 | PRJNA774958_P_NODE_23819_length_320_cov_0.951417_g23572_i0 | PRJNA774958 | 23819 | 320 | 0.951417 | 3.0445344 | Xylanibacter ruminicola | 839 | Bacteria | Bacteria | 58.4 | 6.45e-4 | NTclustered | gi|294471613|gb|CP002006.1| | 264731 | g23572 | i0 | 94.737 | 0.521875 | 38 | 1 | 12 | 1 | 222 | 259 | 2062314 | 2062278 | Prevotella ruminicola 23, complete genome | blastn | 167 | 58.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Xylanibacter | Xylanibacter ruminicola | |
| 26714358 | 26714358 | PRJNA774958_P_NODE_2881_length_938_cov_6.256647_g2711_i0 | PRJNA774958 | 2881 | 938 | 6.256647 | 58.68734886 | Bacteroidota | 976 | Bacteria | Bacteria | 211 | 3.06e-63 | NR | RYG06432.1 | 1869212 | g2711 | i0 | 40.8 | 9.71321961620469 | 284 | 152 | 90.8 | 5 | 28 | 879 | 3 | 270 | RYG06432.1 MAG: purine-nucleoside phosphorylase [Chitinophagaceae bacterium] | diamond | 9111 | 211 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium | ||
| 27401162 | 27401162 | PRJNA774958_P_NODE_33343_length_251_cov_0.865169_g33096_i0 | PRJNA774958 | 33343 | 251 | 0.865169 | 2.17157419 | Parapedobacter composti | 623281 | Bacteria | Bacteria | 45.8 | 0.00338 | NR | WP_397236010.1 | 623281 | g33096 | i0 | 38.3 | 0.717131474103586 | 60 | 32 | 65.7 | 1 | 10 | 174 | 234 | 293 | WP_397236010.1 penicillin-binding protein 1A [Parapedobacter composti] | diamond | 180 | 45.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Parapedobacter | Parapedobacter composti | |
| 29043077 | 29043077 | PRJNA774958_P_NODE_21388_length_343_cov_0.751852_g21141_i0 | PRJNA774958 | 21388 | 343 | 0.751852 | 2.57885236 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 43.5 | 0.0223 | NR | MEM8966557.1 | 1898104 | g21141 | i0 | 38.8 | 0.58600583090379 | 67 | 37 | 56 | 2 | 42 | 233 | 19 | 84 | MEM8966557.1 helix-turn-helix domain-containing protein [Bacteroidota bacterium] | diamond | 201 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 29326971 | 29326971 | PRJNA774958_P_NODE_33029_length_252_cov_0.860335_g32782_i0 | PRJNA774958 | 33029 | 252 | 0.860335 | 2.1680442 | Crocinitomicaceae bacterium | 2026728 | Bacteria | Bacteria | 43.5 | 0.023 | NR | TXI84447.1 | 2026728 | g32782 | i0 | 39.7 | 1.16666666666667 | 58 | 33 | 69 | 1 | 177 | 4 | 24 | 79 | TXI84447.1 MAG: TonB-dependent receptor [Crocinitomicaceae bacterium] | diamond | 294 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Crocinitomicaceae | Crocinitomicaceae bacterium | ||
| 29958573 | 29958573 | PRJNA774958_P_NODE_28951_length_280_cov_1.410628_g28704_i0 | PRJNA774958 | 28951 | 280 | 1.410628 | 3.9497584 | Odoribacter sp. | 1965233 | Bacteria | Bacteria | 43.5 | 0.0239 | NR | MBS1447180.1 | 1965233 | g28704 | i0 | 42.1 | 0.407142857142857 | 38 | 22 | 40.7 | 0 | 168 | 55 | 166 | 203 | MBS1447180.1 hypothetical protein [Odoribacter sp.] | diamond | 114 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Odoribacteraceae | Odoribacter | Odoribacter sp. | |
| 29990225 | 29990225 | PRJNA774958_P_NODE_22431_length_332_cov_3.382239_g22184_i0 | PRJNA774958 | 22431 | 332 | 3.382239 | 11.22903348 | Bizionia sp. | 1954480 | Bacteria | Bacteria | 53.5 | 1.69e-5 | NR | MBQ0768748.1 | 1954480 | g22184 | i0 | 29.4 | 1.96987951807229 | 109 | 53 | 98.5 | 1 | 330 | 4 | 388 | 472 | MBQ0768748.1 heavy metal translocating P-type ATPase [Bizionia sp.] | diamond | 654 | 53.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Bizionia | Bizionia sp. | |
| 31349060 | 31349060 | PRJNA774958_P_NODE_13016_length_451_cov_1.965608_g12769_i0 | PRJNA774958 | 13016 | 451 | 1.965608 | 8.86489208 | Mariniphaga sp. | 1954475 | Bacteria | Bacteria | 45.4 | 0.0348 | NR | MEI7525520.1 | 1954475 | g12769 | i0 | 28.8 | 0.738359201773836 | 111 | 67 | 70.5 | 3 | 407 | 90 | 696 | 799 | MEI7525520.1 MMPL family transporter [Mariniphaga sp.] | diamond | 333 | 45.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Marinilabiliales | Prolixibacteraceae | Mariniphaga | Mariniphaga sp. | |
| 31390247 | 31390247 | PRJNA774958_P_NODE_18456_length_375_cov_1.274834_g18209_i0 | PRJNA774958 | 18456 | 375 | 1.274834 | 4.7806275 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 75.1 | 4.35e-13 | NR | WP_295202251.1 | 1917865 | g18209 | i0 | 36.2 | 6 | 127 | 73 | 97.6 | 5 | 374 | 9 | 199 | 322 | WP_295202251.1 purple acid phosphatase family protein [Sediminibacterium sp.] | diamond | 2250 | 75.1 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Sediminibacterium | Sediminibacterium sp. | |
| 31981463 | 31981463 | PRJNA774958_P_NODE_30018_length_273_cov_0.770000_g29771_i0 | PRJNA774958 | 30018 | 273 | 0.77 | 2.1021 | unclassified Sphingobacterium | 2609468 | Bacteria | Bacteria | 43.9 | 0.0109 | NR | WP_254527946.1 | 2609468 | g29771 | i0 | 31.9 | 0.758241758241758 | 69 | 44 | 75.8 | 1 | 240 | 34 | 92 | 157 | WP_254527946.1 MULTISPECIES: hypothetical protein [unclassified Sphingobacterium] | diamond | 207 | 43.9 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Sphingobacterium | ||
| 32718130 | 32718130 | PRJNA774958_P_NODE_20760_length_349_cov_1.054348_g20513_i0 | PRJNA774958 | 20760 | 349 | 1.054348 | 3.67967452 | Bacteroidota | 976 | Bacteria | Bacteria | 146 | 9.27e-39 | NR | MFH1001605.1 | 1898104 | g20513 | i0 | 60.3 | 30.8853868194842 | 116 | 46 | 99.7 | 0 | 349 | 2 | 428 | 543 | MFH1001605.1 L-glutamate gamma-semialdehyde dehydrogenase [Bacteroidota bacterium] | diamond | 10779 | 146 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 32834510 | 32834510 | PRJNA774958_P_NODE_27460_length_290_cov_1.419355_g27213_i0 | PRJNA774958 | 27460 | 290 | 1.419355 | 4.1161295 | Bacteroidaceae bacterium | 2212467 | Bacteria | Bacteria | 44.7 | 0.0137 | NR | MBQ4003000.1 | 2212467 | g27213 | i0 | 35.5 | 1.66551724137931 | 76 | 46 | 75.5 | 1 | 219 | 1 | 317 | 392 | MBQ4003000.1 DUF3874 domain-containing protein [Bacteroidaceae bacterium] | diamond | 483 | 44.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroidaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;