RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA774958" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA774958 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16055065 16055065 PRJNA774958_P_NODE_1633_length_1186_cov_1.808625_g1505_i0 PRJNA774958 1633 1186 1.808625 21.4502925 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 408 3.61e-136   NR DAC64727.1 2163009 g1505 i0 51 8.10455311973019 402 188 99.9 4 1185 1 52 451 DAC64727.1 MAG TPA: CTP synthase (glutamine hydrolyzing), partial [Candidatus Poseidoniales archaeon] diamond 9612 408 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
27094440 27094440 PRJNA774958_P_NODE_21882_length_338_cov_0.992453_g21635_i0 PRJNA774958 21882 338 0.992453 3.35449114 root 1 Root_unresolved Root_unresolved 57.4 4.14e-7   NR WP_295615967.1 253161 g21635 i0 59.5 4.79289940828402 37 15 32.8 0 153 263 2 38 WP_295615967.1 uracil-DNA glycosylase [uncultured Methanobrevibacter sp.] diamond 1620 57.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;