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contig_metadata

11 rows where bioproject = "PRJNA774958" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 11 ✖

bioproject 1

  • PRJNA774958 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2028619 2028619 PRJNA774958_P_NODE_3262_length_887_cov_2.904177_g3076_i0 PRJNA774958 3262 887 2.904177 25.76004999 Eukaryota 2759 Plants Plants 214 8.88e-62   NR KAK9803851.1 706552 g3076 i0 41 12.608793686584 293 161 96.7 5 887 30 200 487 KAK9803851.1 hypothetical protein WJX73_008551 [Symbiochloris irregularis] diamond 11184 216 0.990740740740741 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
3303596 3303596 PRJNA774958_P_NODE_13843_length_437_cov_2.129121_g13596_i0 PRJNA774958 13843 437 2.129121 9.30425877 Eukaryota 2759 Plants Plants 104 1.9e-23   NR KAI3428667.1 3077 g13596 i0 55.8 9.80320366132723 86 38 59 0 260 3 76 161 KAI3428667.1 hypothetical protein D9Q98_007490 [Chlorella vulgaris] diamond 4284 104 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
9681097 9681097 PRJNA774958_P_NODE_24068_length_318_cov_0.942857_g23821_i0 PRJNA774958 24068 318 0.942857 2.99828526 Chlamydomonas reinhardtii 3055 Plants Plants 220 7.7199999999999995e-53   NTclustered gi|2082244743|ref|XM_001698671.2| 3055 g23821 i0 82.422 11.9905660377358 256 41 80 4 38 291 753 500 Chlamydomonas reinhardtii ribosomal protein L23 (CHLRE_04g211800v5), mRNA blastn 3813 220 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
13962262 13962262 PRJNA774958_P_NODE_7711_length_592_cov_23.566474_g7477_i0 PRJNA774958 7711 592 23.566474 139.51352608 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 293 1.24e-98   NR KAG7669139.1 1650286 g7477 i0 82.6 7.59628378378378 172 24 84.1 1 542 45 1 172 KAG7669139.1 hypothetical protein KSW81_007300 [Chlorella desiccata (nom. nud.)] diamond 4497 293 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
27473708 27473708 PRJNA774958_P_NODE_1363_length_1269_cov_2.124582_g1250_i0 PRJNA774958 1363 1269 2.124582 26.96094558 Eukaryota 2759 Plants Plants 85.9 9.83e-14   NR KAJ9510115.1 44745 g1250 i0 46.7 1.23404255319149 75 40 17.7 0 746 970 80 154 KAJ9510115.1 hypothetical protein QJQ45_015595 [Haematococcus lacustris] diamond 1566 86.7 0.990772779700115 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
27694989 27694989 PRJNA774958_P_NODE_30624_length_268_cov_1.410256_g30377_i0 PRJNA774958 30624 268 1.410256 3.77948608 Eukaryota 2759 Plants Plants 70.5 7.01e-12   NR XP_002948806.1 3068 g30377 i0 54.4 7.6455223880597 79 25 76.1 1 3 206 286 364 XP_002948806.1 uncharacterized protein VOLCADRAFT_104016 [Volvox carteri f. nagariensis] diamond 2049 70.9 0.994358251057828 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
28547431 28547431 PRJNA774958_P_NODE_18027_length_380_cov_1.003257_g17780_i0 PRJNA774958 18027 380 1.003257 3.8123766 Eukaryota 2759 Plants Plants 45.4 0.0173   NR KAF5829472.1 3046 g17780 i0 32.7 1.48421052631579 52 35 41.1 0 9 164 312 363 KAF5829472.1 quinon protein alcohol dehydrogenase-like superfamily [Dunaliella salina] diamond 564 45.8 0.991266375545852 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
29557411 29557411 PRJNA774958_P_NODE_31590_length_262_cov_1.222222_g31343_i0 PRJNA774958 31590 262 1.222222 3.20222164 Eukaryota 2759 Plants Plants 137 3.3699999999999996e-35   NR PRW20811.1 3076 g31343 i0 76.7 29.5534351145038 86 20 98.5 0 3 260 204 289 PRW20811.1 Receptor of activated kinase C component of 40S small ribosomal subunit isoform C [Chlorella sorokiniana] diamond 7743 137 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
31507315 31507315 PRJNA774958_P_NODE_24576_length_313_cov_5.483333_g24329_i0 PRJNA774958 24576 313 5.483333 17.16283229 Trebouxia sp. C 2796353 Plants Plants 97.8 8.04e-24   NR KAL3152508.1 3373145 g24329 i0 68.1 1.37060702875399 72 23 69 0 72 287 46 117 KAL3152508.1 60S ribosomal protein L38 [Trebouxia sp. C0010 RCD-2024] diamond 429 97.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0010 RCD-2024
32654791 32654791 PRJNA774958_P_NODE_32780_length_253_cov_1.711111_g32533_i0 PRJNA774958 32780 253 1.711111 4.32911083 Eukaryota 2759 Plants Plants 45.1 0.00657   NR KAI3438618.1 3077 g32533 i0 45.5 5.60869565217391 44 24 52.2 0 14 145 492 535 KAI3438618.1 hypothetical protein D9Q98_001041 [Chlorella vulgaris] diamond 1419 45.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
32749544 32749544 PRJNA774958_P_NODE_13940_length_436_cov_1.526171_g13693_i0 PRJNA774958 13940 436 1.526171 6.65410556 Chlorellales 35460 Plants Plants 85.9 2.06e-16   NR CAL5227702.1 1274662 g13693 i0 39 4.80275229357798 146 83 99.8 2 435 1 93 233 CAL5227702.1 g10710 [Coccomyxa viridis] diamond 2094 85.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;