RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA774958", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA774958 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28600971 28600971 PRJNA774958_P_NODE_21947_length_337_cov_1.356061_g21700_i0 PRJNA774958 21947 337 1.356061 4.56992557 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 47 0.00359   NR KAJ3444761.1 1746091 g21700 i0 37.2 0.836795252225519 94 50 80.1 4 47 316 270 358 KAJ3444761.1 centaurin/arf [Anaeramoeba flamelloides] diamond 282 47 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
32329959 32329959 PRJNA774958_P_NODE_13799_length_438_cov_1.783562_g13552_i0 PRJNA774958 13799 438 1.783562 7.81200156 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 46.6 0.013   NR XP_067778172.1 135588 g13552 i0 36.1 1.05479452054795 72 44 47.9 1 18 227 953 1024 XP_067778172.1 Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase [Histomonas meleagridis] diamond 462 46.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;