RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA773778", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 5 ✖

tax_phylum 1

  • Preplasmiviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA773778 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3758959 3758959 PRJNA773778_S_NODE_13763_length_380_cov_1.921824_g13613_i0 PRJNA773778 13763 380 1.921824 7.3029312 root 1 Root_unresolved Root_unresolved 702 0   NTclustered gi|2616465679|gb|OR735196.1| 10515 g13613 i0 100 100 380 0 100 0 1 380 3942 3563 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 38000 702 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
6311313 6311313 PRJNA773778_S_NODE_32225_length_275_cov_1.524752_g32075_i0 PRJNA773778 32225 275 1.524752 4.193068 root 1 Root_unresolved Root_unresolved 326 1.35e-84   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g32075 i0 100 100.556363636364 176 0 100 0 100 275 1108 933 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 27653 326 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
7585310 7585310 PRJNA773778_S_NODE_23746_length_309_cov_1.118644_g23596_i0 PRJNA773778 23746 309 1.118644 3.45660996 root 1 Root_unresolved Root_unresolved 566 8.33e-157   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g23596 i0 99.676 100 309 1 100 0 1 309 1307 1615 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 30900 571 0.991243432574431 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
10135990 10135990 PRJNA773778_S_NODE_488_length_1261_cov_2.370370_g432_i0 PRJNA773778 488 1261 2.37037 29.8903657 root 1 Root_unresolved Root_unresolved 2152 0   NTclustered gi|2616465679|gb|OR735196.1| 10515 g432 i0 99.744 95.8762886597938 1174 3 96 0 88 1261 3508 2335 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 120900 2158 0.997219647822057 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
20333770 20333770 PRJNA773778_S_NODE_3836_length_600_cov_3.402277_g3690_i0 PRJNA773778 3836 600 3.402277 20.413662 root 1 Root_unresolved Root_unresolved 1109 0   NTclustered gi|2288721861|gb|OP218818.1| 10535 g3690 i0 100 100.57 600 0 100 0 1 600 1722 2321 Unidentified adenovirus strain CHOP Ad5 blastn 60342 1109 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;