RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA773778" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA773778 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26704951 26704951 PRJNA773778_S_NODE_34421_length_268_cov_1.184615_g34271_i0 PRJNA773778 34421 268 1.184615 3.1747682 Candidatus Rifleibacterium sp. 3022866 Bacteria Bacteria 129 3.83e-35   NR HNX77617.1 3022866 g34271 i0 74.2 0.996268656716418 89 23 99.6 0 267 1 11 99 HNX77617.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Candidatus Rifleibacterium sp.] diamond 267 129 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium sp.
28127312 28127312 PRJNA773778_S_NODE_39065_length_254_cov_1.276243_g38915_i0 PRJNA773778 39065 254 1.276243 3.24165722 Candidatus Rifleibacterium amylolyticum 2760816 Bacteria Bacteria 91.7 1.68e-22   NR KAF1080359.1 2760816 g38915 i0 100 0.55511811023622 47 0 55.5 0 112 252 1 47 KAF1080359.1 MAG: hypothetical protein GQF41_3183 [Candidatus Rifleibacterium amylolyticum] diamond 141 91.7 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium amylolyticum
28221763 28221763 PRJNA773778_S_NODE_39126_length_254_cov_1.248619_g38976_i0 PRJNA773778 39126 254 1.248619 3.17149226 Candidatus Rifleibacterium amylolyticum 2760816 Bacteria Bacteria 66.6 1.34e-12   NR KAF1079635.1 2760816 g38976 i0 91.4 0.413385826771654 35 3 41.3 0 2 106 15 49 KAF1079635.1 MAG: hypothetical protein GQF41_4193 [Candidatus Rifleibacterium amylolyticum] diamond 105 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium amylolyticum
30306593 30306593 PRJNA773778_S_NODE_29072_length_286_cov_2.089202_g28922_i0 PRJNA773778 29072 286 2.089202 5.97511772 Candidatus Rifleibacterium amylolyticum 2760816 Bacteria Bacteria 140 1.38e-41   NR KAF1080357.1 2760816 g28922 i0 98.5 0.713286713286713 68 1 71.3 0 29 232 1 68 KAF1080357.1 MAG: hypothetical protein GQF41_3181 [Candidatus Rifleibacterium amylolyticum] diamond 204 140 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium amylolyticum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;