RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA773778" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA773778 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27116357 27116357 PRJNA773778_S_NODE_28662_length_288_cov_1.353488_g28512_i0 PRJNA773778 28662 288 1.353488 3.89804544 Babesia bigemina 5866 SAR_Eukaryotes SAR_Eukaryotes 62 5.42e-10   NR XP_012770480.1 5866 g28512 i0 62.5 0.5 48 18 50 0 232 89 60 107 XP_012770480.1 hypothetical protein, conserved [Babesia bigemina] diamond 144 62 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
30432872 30432872 PRJNA773778_S_NODE_42853_length_248_cov_0.880000_g42703_i0 PRJNA773778 42853 248 0.88 2.1824 Plasmodium ovale wallikeri 864142 SAR_Eukaryotes SAR_Eukaryotes 77 2.68e-14   NR SBT55340.1 864142 g42703 i0 50.6 0.955645161290323 79 39 95.6 0 240 4 308 386 SBT55340.1 PIR Superfamily Protein [Plasmodium ovale wallikeri] diamond 237 77 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium ovale

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;