RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA773778", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 1 ✖

tax_kingdom 1

  • Thermotogati · 1 ✖

bioproject 1

  • PRJNA773778 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12230558 12230558 PRJNA773778_S_NODE_19450_length_332_cov_5.308880_g19300_i0 PRJNA773778 19450 332 5.30888 17.6254816 Aminobacterium sp. MB27-C1 3070661 Bacteria Bacteria 233 1.04e-56   NTclustered gi|2569590977|gb|CP133089.1| 3070661 g19300 i0 79.641 1.46385542168675 334 60 99 8 3 332 655656 655985 Aminobacterium sp. MB27-C1 chromosome, complete genome blastn 486 233 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Aminobacterium Aminobacterium sp. MB27-C1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;