RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJNA773778" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 8 ✖

bioproject 1

  • PRJNA773778 · 8 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
750810 750810 PRJNA773778_S_NODE_17161_length_348_cov_8.970909_g17011_i0 PRJNA773778 17161 348 8.970909 31.21876332 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.033   NTclustered gi|9964314|ref|NC_002520.1| 28321 g17011 i0 94.286 0.100574712643678 35 1 10 1 208 241 153509 153475 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei
3758959 3758959 PRJNA773778_S_NODE_13763_length_380_cov_1.921824_g13613_i0 PRJNA773778 13763 380 1.921824 7.3029312 root 1 Root_unresolved Root_unresolved 702 0   NTclustered gi|2616465679|gb|OR735196.1| 10515 g13613 i0 100 100 380 0 100 0 1 380 3942 3563 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 38000 702 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
6311313 6311313 PRJNA773778_S_NODE_32225_length_275_cov_1.524752_g32075_i0 PRJNA773778 32225 275 1.524752 4.193068 root 1 Root_unresolved Root_unresolved 326 1.35e-84   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g32075 i0 100 100.556363636364 176 0 100 0 100 275 1108 933 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 27653 326 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
7585310 7585310 PRJNA773778_S_NODE_23746_length_309_cov_1.118644_g23596_i0 PRJNA773778 23746 309 1.118644 3.45660996 root 1 Root_unresolved Root_unresolved 566 8.33e-157   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g23596 i0 99.676 100 309 1 100 0 1 309 1307 1615 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 30900 571 0.991243432574431 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
10135990 10135990 PRJNA773778_S_NODE_488_length_1261_cov_2.370370_g432_i0 PRJNA773778 488 1261 2.37037 29.8903657 root 1 Root_unresolved Root_unresolved 2152 0   NTclustered gi|2616465679|gb|OR735196.1| 10515 g432 i0 99.744 95.8762886597938 1174 3 96 0 88 1261 3508 2335 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 120900 2158 0.997219647822057 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
20333770 20333770 PRJNA773778_S_NODE_3836_length_600_cov_3.402277_g3690_i0 PRJNA773778 3836 600 3.402277 20.413662 root 1 Root_unresolved Root_unresolved 1109 0   NTclustered gi|2288721861|gb|OP218818.1| 10535 g3690 i0 100 100.57 600 0 100 0 1 600 1722 2321 Unidentified adenovirus strain CHOP Ad5 blastn 60342 1109 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
22884914 22884914 PRJNA773778_S_NODE_15998_length_358_cov_2.971930_g15848_i0 PRJNA773778 15998 358 2.97193 10.6395094 Viruses 10239 Viruses Viruses 62.1 5.63e-5   NTclustered gi|2755084441|gb|PP943425.1| 10258 g15848 i0 100 9.91340782122905 33 0 9 0 1 33 67619 67587 Orf virus isolate FX10, partial genome blastn 3549 62.1 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf
25433962 25433962 PRJNA773778_S_NODE_33860_length_270_cov_1.172589_g33710_i0 PRJNA773778 33860 270 1.172589 3.1659903 Viruses 10239 Viruses Viruses 56.5 0.002   NTclustered gi|2755084565|gb|PP943426.1| 10258 g33710 i0 96.97 0.244444444444444 33 1 12 0 238 270 121085 121053 Orf virus isolate FX17, partial genome blastn 66 56.5 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;