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contig_metadata

6 rows where bioproject = "PRJNA773778", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA773778 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2026932 2026932 PRJNA773778_S_NODE_25162_length_302_cov_3.462882_g25012_i0 PRJNA773778 25162 302 3.462882 10.45790364 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.028   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g25012 i0 100 0.0927152317880795 28 0 9 0 1 28 11 38 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
4579430 4579430 PRJNA773778_S_NODE_35544_length_264_cov_2.811518_g35394_i0 PRJNA773778 35544 264 2.811518 7.42240752 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g35394 i0 100 0.534090909090909 29 0 11 0 1 29 10 38 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 141 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
13505338 13505338 PRJNA773778_S_NODE_5351_length_539_cov_5.169528_g5202_i0 PRJNA773778 5351 539 5.169528 27.86375592 Mesodinium rubrum 704171 SAR_Eukaryotes SAR_Eukaryotes 953 0   NTclustered gi|1386676391|gb|MG018339.1| 704171 g5202 i0 98.696 80.9628942486085 537 7 99 0 3 539 2207 1671 Mesodinium rubrum isolate DK2009 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 43639 953 1 Eukaryota Sar   Ciliophora Litostomatea Cyclotrichida Mesodiniidae Mesodinium Mesodinium rubrum
19058959 19058959 PRJNA773778_S_NODE_24035_length_307_cov_4.247863_g23885_i0 PRJNA773778 24035 307 4.247863 13.04093941 root 1 Root_unresolved Root_unresolved 556 4.98e-154   NTclustered gi|345541658|gb|JN547815.1| 5911 g23885 i0 99.349 75.6775244299674 307 2 100 0 1 307 3498 3804 Tetrahymena thermophila strain ATCC 30382 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence blastn 23233 556 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
19878082 19878082 PRJNA773778_S_NODE_38176_length_256_cov_4.109290_g38026_i0 PRJNA773778 38176 256 4.10929 10.5197824 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 446 9.139999999999999e-121   NTclustered gi|512134943|gb|JX178902.1| 1295638 g38026 i0 98.047 98.2421875 256 5 100 0 1 256 1341 1086 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 25150 446 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
30306595 30306595 PRJNA773778_S_NODE_45452_length_244_cov_3.602339_g45302_i0 PRJNA773778 45452 244 3.602339 8.78970716 Paramecium sonneborni 65129 SAR_Eukaryotes SAR_Eukaryotes 60.5 2.2e-8   NR CAD8072686.1 65129 g45302 i0 67.3 1.80737704918033 49 16 60.2 0 154 8 43 91 CAD8072686.1 unnamed protein product [Paramecium sonneborni] diamond 441 60.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;