contig_metadata
15 rows where bioproject = "PRJNA773778" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2026876 | 2026876 | PRJNA773778_S_NODE_22662_length_314_cov_2.875519_g22512_i0 | PRJNA773778 | 22662 | 314 | 2.875519 | 9.02912966 | Tepidisphaerales bacterium | 2795155 | Bacteria | Bacteria | 87.8 | 1.31e-17 | NR | MFN4243764.1 | 2795155 | g22512 | i0 | 66.1 | 0.563694267515924 | 59 | 20 | 56.4 | 0 | 191 | 15 | 204 | 262 | MFN4243764.1 hypothetical protein [Tepidisphaerales bacterium] | diamond | 177 | 87.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaerales bacterium | |||
| 9679200 | 9679200 | PRJNA773778_S_NODE_11148_length_412_cov_7.206490_g10998_i0 | PRJNA773778 | 11148 | 412 | 7.20649 | 29.6907388 | uncultured Planctomycetales bacterium | 100371 | Bacteria | Bacteria | 723 | 0 | NTclustered | gi|383502255|gb|JQ860982.1| | 100371 | g10998 | i0 | 99.746 | 94.0849514563107 | 394 | 1 | 96 | 0 | 1 | 394 | 61 | 454 | Uncultured Planctomycetales bacterium clone 14 15th day 16S ribosomal RNA gene, partial sequence | blastn | 38763 | 723 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | uncultured Planctomycetales bacterium | |||
| 12686954 | 12686954 | PRJNA773778_S_NODE_49690_length_226_cov_4.111111_g49540_i0 | PRJNA773778 | 49690 | 226 | 4.111111 | 9.29111086 | Lacipirellulaceae bacterium | 2691534 | Bacteria | Bacteria | 119 | 3.53e-30 | NR | HEX4412903.1 | 2691534 | g49540 | i0 | 77.5 | 0.942477876106195 | 71 | 16 | 94.2 | 0 | 2 | 214 | 222 | 292 | HEX4412903.1 alpha-amylase family glycosyl hydrolase [Lacipirellulaceae bacterium] | diamond | 213 | 119 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Lacipirellulaceae bacterium | ||
| 14779631 | 14779631 | PRJNA773778_S_NODE_17552_length_345_cov_4.529412_g17402_i0 | PRJNA773778 | 17552 | 345 | 4.529412 | 15.6264714 | Verrucomicrobium sp. GAS474 | 1882831 | Bacteria | Bacteria | 160 | 6.229999999999999e-45 | NR | WP_093287198.1 | 1882831 | g17402 | i0 | 80.6 | 0.808695652173913 | 93 | 18 | 80.9 | 0 | 344 | 66 | 342 | 434 | WP_093287198.1 adenosylhomocysteinase [Verrucomicrobium sp. GAS474] | diamond | 279 | 160 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium sp. GAS474 | |
| 27811684 | 27811684 | PRJNA773778_S_NODE_36164_length_262_cov_6.613757_g36014_i0 | PRJNA773778 | 36164 | 262 | 6.613757 | 17.32804334 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 57.8 | 1.22e-8 | NR | RYD84282.1 | 2026800 | g36014 | i0 | 48.5 | 0.755725190839695 | 66 | 34 | 75.6 | 0 | 44 | 241 | 1 | 66 | RYD84282.1 MAG: hypothetical protein EOP84_05925, partial [Verrucomicrobiaceae bacterium] | diamond | 198 | 57.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 28064017 | 28064017 | PRJNA773778_S_NODE_37885_length_257_cov_2.510870_g37735_i0 | PRJNA773778 | 37885 | 257 | 2.51087 | 6.4529359 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 101 | 2.76e-25 | NR | MFN6128411.1 | 2026780 | g37735 | i0 | 66.7 | 2.52140077821012 | 72 | 24 | 84 | 0 | 23 | 238 | 61 | 132 | MFN6128411.1 hypothetical protein [Planctomycetota bacterium] | diamond | 648 | 101 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28411495 | 28411495 | PRJNA773778_S_NODE_43986_length_246_cov_1.335260_g43836_i0 | PRJNA773778 | 43986 | 246 | 1.33526 | 3.2847396 | Candidatus Protochlamydia amoebophila | 362787 | Bacteria | Bacteria | 44.3 | 6.86e-4 | NR | MBS4163025.1 | 362787 | g43836 | i0 | 60 | 0.426829268292683 | 35 | 14 | 42.7 | 0 | 195 | 91 | 6 | 40 | MBS4163025.1 hypothetical protein [Candidatus Protochlamydia amoebophila] | diamond | 105 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 29905058 | 29905058 | PRJNA773778_S_NODE_38911_length_254_cov_2.552486_g38761_i0 | PRJNA773778 | 38911 | 254 | 2.552486 | 6.48331444 | Bacteria | 2 | Bacteria | Bacteria | 99.4 | 1.49e-22 | NR | MCX7407258.1 | 2053591 | g38761 | i0 | 53.6 | 4.7244094488189 | 84 | 37 | 99.2 | 1 | 1 | 252 | 222 | 303 | MCX7407258.1 type III polyketide synthase [Planctomycetales bacterium] | diamond | 1200 | 100 | 0.994 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetales bacterium | |||
| 30179581 | 30179581 | PRJNA773778_S_NODE_31832_length_276_cov_6.305419_g31682_i0 | PRJNA773778 | 31832 | 276 | 6.305419 | 17.40295644 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 68.9 | 8.27e-13 | NR | HEX8341348.1 | 2876886 | g31682 | i0 | 78.4 | 0.402173913043478 | 37 | 8 | 40.2 | 0 | 276 | 166 | 65 | 101 | HEX8341348.1 hypothetical protein [Tepidisphaeraceae bacterium] | diamond | 111 | 68.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 30211125 | 30211125 | PRJNA773778_S_NODE_13312_length_385_cov_4.682692_g13162_i0 | PRJNA773778 | 13312 | 385 | 4.682692 | 18.0283642 | Pirellula sp. | 117 | Bacteria | Bacteria | 57 | 1.06e-7 | NR | MBA4105996.1 | 117 | g13162 | i0 | 64.9 | 0.584415584415584 | 37 | 13 | 28.8 | 0 | 76 | 186 | 1 | 37 | MBA4105996.1 hypothetical protein [Pirellula sp.] | diamond | 225 | 57 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellula | Pirellula sp. | |
| 30274786 | 30274786 | PRJNA773778_S_NODE_40532_length_251_cov_0.865169_g40382_i0 | PRJNA773778 | 40532 | 251 | 0.865169 | 2.17157419 | Thermoguttaceae bacterium | 2691551 | Bacteria | Bacteria | 138 | 5.87e-41 | NR | MDY0169834.1 | 2691551 | g40382 | i0 | 98.5 | 0.776892430278884 | 65 | 1 | 77.7 | 0 | 243 | 49 | 1 | 65 | MDY0169834.1 hypothetical protein [Thermoguttaceae bacterium] | diamond | 195 | 138 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Thermoguttaceae | Thermoguttaceae bacterium | ||
| 30495820 | 30495820 | PRJNA773778_S_NODE_44553_length_246_cov_0.867052_g44403_i0 | PRJNA773778 | 44553 | 246 | 0.867052 | 2.13294792 | Chlamydia psittaci | 83554 | Bacteria | Bacteria | 62.4 | 5.93e-11 | NR | EPJ19409.1 | 1112257 | g44403 | i0 | 66.7 | 0.548780487804878 | 45 | 15 | 54.9 | 0 | 42 | 176 | 5 | 49 | EPJ19409.1 hypothetical protein CP02DC21_1087, partial [Chlamydia psittaci 02DC21] | diamond | 135 | 62.4 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Chlamydia psittaci | |
| 30969796 | 30969796 | PRJNA773778_S_NODE_20434_length_326_cov_8.411067_g20284_i0 | PRJNA773778 | 20434 | 326 | 8.411067 | 27.42007842 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 72 | 4.54e-12 | NR | MDB5328349.1 | 2052180 | g20284 | i0 | 72.9 | 0.441717791411043 | 48 | 13 | 44.2 | 0 | 322 | 179 | 358 | 405 | MDB5328349.1 putative transporter ATP-binding protein [Phycisphaerales bacterium] | diamond | 144 | 72 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 31253987 | 31253987 | PRJNA773778_S_NODE_26375_length_297_cov_2.718750_g26225_i0 | PRJNA773778 | 26375 | 297 | 2.71875 | 8.0746875 | Kiritimatiellota bacterium | 2599938 | Bacteria | Bacteria | 42 | 0.0352 | NR | MCX7006478.1 | 2599938 | g26225 | i0 | 40.9 | 0.444444444444444 | 44 | 26 | 44.4 | 0 | 157 | 288 | 54 | 97 | MCX7006478.1 hypothetical protein [Kiritimatiellota bacterium] | diamond | 132 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellota bacterium | |||||
| 32434324 | 32434324 | PRJNA773778_S_NODE_47379_length_242_cov_1.005917_g47229_i0 | PRJNA773778 | 47379 | 242 | 1.005917 | 2.43431914 | Chlamydia | 810 | Bacteria | Bacteria | 70.5 | 3.63e-14 | NR | EPJ19409.1 | 1112257 | g47229 | i0 | 75 | 1.06611570247934 | 44 | 11 | 54.5 | 0 | 180 | 49 | 7 | 50 | EPJ19409.1 hypothetical protein CP02DC21_1087, partial [Chlamydia psittaci 02DC21] | diamond | 258 | 71.2 | 0.990168539325843 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Chlamydia psittaci |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;