RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA773778", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA773778 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7129804 7129804 PRJNA773778_S_NODE_30146_length_282_cov_2.210526_g29996_i0 PRJNA773778 30146 282 2.210526 6.23368332 Opisthokonta 33154 Fungi Fungi 105 1.94e-24   NR CAG8551440.1 4874 g29996 i0 91.1 26.1489361702128 56 5 59.6 0 71 238 283 338 CAG8551440.1 4575_t:CDS:2, partial [Gigaspora margarita] diamond 7374 105 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
27694970 27694970 PRJNA773778_S_NODE_16224_length_356_cov_3.537102_g16074_i0 PRJNA773778 16224 356 3.537102 12.59208312 Rhizophagus 295919 Fungi Fungi 55.5 4.43e-6   NR GBB97182.1 94130 g16074 i0 36.8 3.10112359550562 76 48 64 0 76 303 376 451 GBB97182.1 hypothetical protein RclHR1_29300002 [Rhizophagus clarus] diamond 1104 55.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus clarus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;