RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA773778", tax_clade = "Opisthokonta" and tax_phylum = "Hemichordata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA773778 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7130369 7130369 PRJNA773778_S_NODE_9566_length_438_cov_1.528767_g9416_i0 PRJNA773778 9566 438 1.528767 6.69599946 Ptychodera flava 63121 Hemichordata other_Eukaryota 422 2.7999999999999994e-113   NTclustered gi|2875693515|ref|XM_070680038.1| 63121 g9416 i0 84.382 100.707762557078 429 67 98 0 9 437 731 303 PREDICTED: Ptychodera flava tubulin beta-4B chain-like (LOC139117164), mRNA blastn 44110 422 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
29547848 29547848 PRJNA773778_S_NODE_12370_length_396_cov_4.959752_g12220_i0 PRJNA773778 12370 396 4.959752 19.64061792 Ptychodera flava 63121 Hemichordata other_Eukaryota 65.1 9.57e-10   NR XP_070559470.1 63121 g12220 i0 64.6 2.25 48 17 36.4 0 306 163 161 208 XP_070559470.1 uncharacterized protein [Ptychodera flava] diamond 891 65.1 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;