RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA773778", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA773778 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26958229 26958229 PRJNA773778_S_NODE_28502_length_289_cov_0.865741_g28352_i0 PRJNA773778 28502 289 0.865741 2.50199149 Porites lobata 104759 Cnidaria other_Eukaryota 55.5 2.12e-6   NR CAH3173632.1 104759 g28352 i0 50.9 1.18339100346021 57 27 59.2 1 28 198 1 56 CAH3173632.1 unnamed protein product [Porites lobata] diamond 342 55.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites lobata
28421085 28421085 PRJNA773778_S_NODE_12846_length_391_cov_1.059748_g12696_i0 PRJNA773778 12846 391 1.059748 4.14361468 Porites 46719 Cnidaria other_Eukaryota 61.2 2.68e-9   NR CAH3175889.1 104178 g12696 i0 59.1 1.34271099744246 44 18 33.8 0 7 138 55 98 CAH3175889.1 unnamed protein product [Porites evermanni] diamond 525 61.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites evermanni
30748486 30748486 PRJNA773778_S_NODE_46694_length_243_cov_0.905882_g46544_i0 PRJNA773778 46694 243 0.905882 2.20129326 Desmophyllum pertusum 174260 Cnidaria other_Eukaryota 90.1 2.09e-20   NR KAJ7373445.1 174260 g46544 i0 74 0.617283950617284 50 13 61.7 0 94 243 41 90 KAJ7373445.1 hypothetical protein OS493_013040 [Desmophyllum pertusum] diamond 150 90.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Caryophylliidae Desmophyllum Desmophyllum pertusum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;