RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA773778" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 8 ✖

bioproject 1

  • PRJNA773778 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3302343 3302343 PRJNA773778_S_NODE_36243_length_262_cov_1.857143_g36093_i0 PRJNA773778 36243 262 1.857143 4.86571466 Rapaza viridis 1112050 Euglenozoa other_Eukaryota 202 2.24e-47   NTclustered gi|383210384|dbj|AB679269.1| 1112050 g36093 i0 85.5 0.763358778625954 200 21 76 6 8 205 1527 1334 Rapaza viridis gene for small subunit ribosomal RNA, partial sequence blastn 200 202 1 Eukaryota Discoba   Euglenozoa Euglenida Rapazida Rapazidae Rapaza Rapaza viridis
7585382 7585382 PRJNA773778_S_NODE_37886_length_257_cov_2.510870_g37736_i0 PRJNA773778 37886 257 2.51087 6.4529359 Neobodo 312470 Euglenozoa other_Eukaryota 464 2.5299999999999998e-126   NTclustered gi|1832418760|gb|MT355131.1| 2728140 g37736 i0 99.222 74.3618677042802 257 2 100 0 1 257 906 650 Neobodo sp. HFCC729 small subunit ribosomal RNA gene, partial sequence blastn 19111 464 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo sp. HFCC729
16053404 16053404 PRJNA773778_S_NODE_19593_length_331_cov_10.895349_g19443_i0 PRJNA773778 19593 331 10.895349 36.06360519 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 180 1.3699999999999996e-40   NTclustered gi|2031924363|emb|OD955780.1| 5763 g19443 i0 85.799 86.5347432024169 169 24 51 0 163 331 1438 1270 Naegleria fowleri Karachi_NF001 strain blastn 28643 180 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
19878238 19878238 PRJNA773778_S_NODE_4416_length_574_cov_4.211577_g4268_i0 PRJNA773778 4416 574 4.211577 24.17445198 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 1011 0   NTclustered gi|427188201|dbj|AB757706.1| 56466 g4268 i0 99.11 22.698606271777 562 5 98 0 13 574 1044 483 Peranema trichophorum rpl3 mRNA for 60S ribosomal protein L3, partial cds, strain: K-01 blastn 13029 1011 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
23704058 23704058 PRJNA773778_S_NODE_31259_length_278_cov_3.497561_g31109_i0 PRJNA773778 31259 278 3.497561 9.72321958 Rapaza viridis 1112050 Euglenozoa other_Eukaryota 278 3.88e-70   NTclustered gi|383210384|dbj|AB679269.1| 1112050 g31109 i0 84.698 8.11870503597122 281 39 100 3 1 278 99 378 Rapaza viridis gene for small subunit ribosomal RNA, partial sequence blastn 2257 278 1 Eukaryota Discoba   Euglenozoa Euglenida Rapazida Rapazidae Rapaza Rapaza viridis
27053426 27053426 PRJNA773778_S_NODE_11322_length_410_cov_2.284866_g11172_i0 PRJNA773778 11322 410 2.284866 9.3679506 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 60.1 1.04e-7   NR KAJ9467986.1 91374 g11172 i0 38.7 0.907317073170732 124 69 87.1 2 408 52 125 246 KAJ9467986.1 Zinc finger CCCH domain-containing protein 11 [Diplonema papillatum] diamond 372 60.1 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
29169322 29169322 PRJNA773778_S_NODE_6489_length_504_cov_17.529002_g6339_i0 PRJNA773778 6489 504 17.529002 88.34617008 Bodo saltans 75058 Euglenozoa other_Eukaryota 92.8 2.33e-20   NR CUG02225.1 75058 g6339 i0 40 1.19047619047619 100 59 59.5 1 92 391 45 143 CUG02225.1 Hypothetical protein, putative, partial [Bodo saltans] diamond 600 92.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
29326940 29326940 PRJNA773778_S_NODE_17169_length_348_cov_5.880000_g17019_i0 PRJNA773778 17169 348 5.88 20.4624 Euglena gracilis 3039 Euglenozoa other_Eukaryota 125 1.6e-33   NR 6ZJ3_SI 3039 g17019 i0 60.8 0.836206896551724 97 38 83.6 0 346 56 103 199 6ZJ3_SI Chain SI, Ribosomal protein eS7 [Euglena gracilis] diamond 291 125 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;