RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA773778" and tax_clade = "Cyanobacteriota/Melainabacteria group"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA773778 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16054137 16054137 PRJNA773778_S_NODE_5773_length_526_cov_3.229581_g5624_i0 PRJNA773778 5773 526 3.229581 16.98759606 Nostoc sp. NIES-2111 1973475 Bacteria Bacteria 398 5.749999999999997e-106   NTclustered gi|1210116560|dbj|AP018184.1| 1973475 g5624 i0 83.894 4.5171102661597 416 67 79 0 69 484 3958258 3958673 Nostoc sp. NIES-2111 DNA, nearly complete genome blastn 2376 398 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc sp. NIES-2111
31507283 31507283 PRJNA773778_S_NODE_48836_length_239_cov_2.734940_g48686_i0 PRJNA773778 48836 239 2.73494 6.5365066 Candidatus Gastranaerophilaceae bacterium 3022870 Bacteria Bacteria 85.1 5.12e-18   NR MFA7659068.1 3022870 g48686 i0 53.9 1.90794979079498 76 35 95.4 0 229 2 2 77 MFA7659068.1 vWA domain-containing protein [Candidatus Gastranaerophilaceae bacterium] diamond 456 85.1 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales Candidatus Gastranaerophilaceae   Candidatus Gastranaerophilaceae bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;