contig_metadata
14 rows where bioproject = "PRJNA773778" and tax_clade = "Bacteria candidate phyla"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9679334 | 9679334 | PRJNA773778_S_NODE_17708_length_344_cov_2.542435_g17558_i0 | PRJNA773778 | 17708 | 344 | 2.542435 | 8.7459764 | Candidatus Ozemobacteraceae bacterium | 2818468 | Bacteria | Bacteria | 244 | 5e-60 | NTclustered | gi|2907625676|emb|OZ223236.1| | 2818468 | g17558 | i0 | 80.805 | 42.2151162790698 | 323 | 53 | 92 | 9 | 1 | 318 | 2527928 | 2527610 | MAG: Candidatus Ozemobacteraceae bacterium isolate 4ee0fdf2-fbb4-4151-bfa0-813162405533 genome assembly, chromosome: 2 | blastn | 14522 | 244 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Ozemobacteria | Candidatus Ozemobacteraceae | Candidatus Ozemobacteraceae bacterium | |||||
| 22428706 | 22428706 | PRJNA773778_S_NODE_41578_length_249_cov_4.198864_g41428_i0 | PRJNA773778 | 41578 | 249 | 4.198864 | 10.45517136 | Candidatus Nomurabacteria bacterium | 2052152 | Bacteria | Bacteria | 300 | 7.29e-77 | NTclustered | gi|2258875662|gb|CP060232.1| | 2052152 | g41428 | i0 | 93.532 | 66.6224899598394 | 201 | 13 | 81 | 0 | 1 | 201 | 964828 | 964628 | MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome | blastn | 16589 | 300 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Nomuraibacteriota | Candidatus Nomurabacteria bacterium | ||||||
| 26704951 | 26704951 | PRJNA773778_S_NODE_34421_length_268_cov_1.184615_g34271_i0 | PRJNA773778 | 34421 | 268 | 1.184615 | 3.1747682 | Candidatus Rifleibacterium sp. | 3022866 | Bacteria | Bacteria | 129 | 3.83e-35 | NR | HNX77617.1 | 3022866 | g34271 | i0 | 74.2 | 0.996268656716418 | 89 | 23 | 99.6 | 0 | 267 | 1 | 11 | 99 | HNX77617.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Candidatus Rifleibacterium sp.] | diamond | 267 | 129 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Rifleibacteriota | Candidatus Rifleibacterium | Candidatus Rifleibacterium sp. | |||||
| 27274654 | 27274654 | PRJNA773778_S_NODE_23743_length_309_cov_1.152542_g23593_i0 | PRJNA773778 | 23743 | 309 | 1.152542 | 3.56135478 | Candidatus Altimarinota bacterium | 2044595 | Bacteria | Bacteria | 126 | 4.41e-32 | NR | MBW7954729.1 | 2044595 | g23593 | i0 | 73.8 | 0.776699029126214 | 80 | 21 | 77.7 | 0 | 241 | 2 | 342 | 421 | MBW7954729.1 S41 family peptidase [Candidatus Altimarinota bacterium] | diamond | 240 | 126 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Altimarinota | Candidatus Altimarinota bacterium | ||||||
| 27369753 | 27369753 | PRJNA773778_S_NODE_7303_length_483_cov_6.009756_g7153_i0 | PRJNA773778 | 7303 | 483 | 6.009756 | 29.02712148 | Candidatus Saccharimonadaceae bacterium | 2830836 | Bacteria | Bacteria | 168 | 4.88e-48 | NR | MBS7346392.1 | 2830836 | g7153 | i0 | 68 | 3.03105590062112 | 122 | 39 | 75.8 | 0 | 2 | 367 | 162 | 283 | MBS7346392.1 glycosyltransferase family 2 protein [Candidatus Saccharimonadaceae bacterium] | diamond | 1464 | 168 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Saccharimonadaceae bacterium | |||
| 28127312 | 28127312 | PRJNA773778_S_NODE_39065_length_254_cov_1.276243_g38915_i0 | PRJNA773778 | 39065 | 254 | 1.276243 | 3.24165722 | Candidatus Rifleibacterium amylolyticum | 2760816 | Bacteria | Bacteria | 91.7 | 1.68e-22 | NR | KAF1080359.1 | 2760816 | g38915 | i0 | 100 | 0.55511811023622 | 47 | 0 | 55.5 | 0 | 112 | 252 | 1 | 47 | KAF1080359.1 MAG: hypothetical protein GQF41_3183 [Candidatus Rifleibacterium amylolyticum] | diamond | 141 | 91.7 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Rifleibacteriota | Candidatus Rifleibacterium | Candidatus Rifleibacterium amylolyticum | |||||
| 28221763 | 28221763 | PRJNA773778_S_NODE_39126_length_254_cov_1.248619_g38976_i0 | PRJNA773778 | 39126 | 254 | 1.248619 | 3.17149226 | Candidatus Rifleibacterium amylolyticum | 2760816 | Bacteria | Bacteria | 66.6 | 1.34e-12 | NR | KAF1079635.1 | 2760816 | g38976 | i0 | 91.4 | 0.413385826771654 | 35 | 3 | 41.3 | 0 | 2 | 106 | 15 | 49 | KAF1079635.1 MAG: hypothetical protein GQF41_4193 [Candidatus Rifleibacterium amylolyticum] | diamond | 105 | 66.6 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Rifleibacteriota | Candidatus Rifleibacterium | Candidatus Rifleibacterium amylolyticum | |||||
| 29516298 | 29516298 | PRJNA773778_S_NODE_28030_length_290_cov_3.608295_g27880_i0 | PRJNA773778 | 28030 | 290 | 3.608295 | 10.4640555 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 48.1 | 7.34e-4 | NR | MDO8266012.1 | 2026720 | g27880 | i0 | 39.1 | 1.82068965517241 | 64 | 39 | 66.2 | 0 | 85 | 276 | 177 | 240 | MDO8266012.1 PepSY domain-containing protein [Candidatus Saccharibacteria bacterium] | diamond | 528 | 48.1 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 30021933 | 30021933 | PRJNA773778_S_NODE_38211_length_256_cov_2.032787_g38061_i0 | PRJNA773778 | 38211 | 256 | 2.032787 | 5.20393472 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 60.5 | 2.11e-8 | NR | MDB5176421.1 | 2026720 | g38061 | i0 | 84.4 | 0.375 | 32 | 5 | 37.5 | 0 | 1 | 96 | 286 | 317 | MDB5176421.1 mechanosensitive ion channel MscS, small conductance mechanosensitive channel [Candidatus Saccharibacteria bacterium] | diamond | 96 | 60.5 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 30306593 | 30306593 | PRJNA773778_S_NODE_29072_length_286_cov_2.089202_g28922_i0 | PRJNA773778 | 29072 | 286 | 2.089202 | 5.97511772 | Candidatus Rifleibacterium amylolyticum | 2760816 | Bacteria | Bacteria | 140 | 1.38e-41 | NR | KAF1080357.1 | 2760816 | g28922 | i0 | 98.5 | 0.713286713286713 | 68 | 1 | 71.3 | 0 | 29 | 232 | 1 | 68 | KAF1080357.1 MAG: hypothetical protein GQF41_3181 [Candidatus Rifleibacterium amylolyticum] | diamond | 204 | 140 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Rifleibacteriota | Candidatus Rifleibacterium | Candidatus Rifleibacterium amylolyticum | |||||
| 30369781 | 30369781 | PRJNA773778_S_NODE_44932_length_245_cov_1.081395_g44782_i0 | PRJNA773778 | 44932 | 245 | 1.081395 | 2.64941775 | Candidatus Dojkabacteria bacterium | 2099670 | Bacteria | Bacteria | 111 | 1.3999999999999996e-29 | NR | HRY22430.1 | 2099670 | g44782 | i0 | 67.6 | 0.906122448979592 | 74 | 24 | 90.6 | 0 | 245 | 24 | 47 | 120 | HRY22430.1 hypothetical protein [Candidatus Dojkabacteria bacterium] | diamond | 222 | 111 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Dojkabacteria bacterium | |||||||
| 30527210 | 30527210 | PRJNA773778_S_NODE_38213_length_256_cov_2.005464_g38063_i0 | PRJNA773778 | 38213 | 256 | 2.005464 | 5.13398784 | Candidatus Dojkabacteria bacterium | 2099670 | Bacteria | Bacteria | 41.6 | 0.0126 | NR | NLE31306.1 | 2099670 | g38063 | i0 | 39.3 | 0.71484375 | 61 | 30 | 69.1 | 3 | 234 | 58 | 4 | 59 | NLE31306.1 hypothetical protein [Candidatus Dojkabacteria bacterium] | diamond | 183 | 41.6 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Dojkabacteria bacterium | |||||||
| 31095904 | 31095904 | PRJNA773778_S_NODE_49035_length_236_cov_5.668712_g48885_i0 | PRJNA773778 | 49035 | 236 | 5.668712 | 13.37816032 | Candidatus Saccharimonadales bacterium | 2973664 | Bacteria | Bacteria | 82.8 | 8.58e-17 | NR | HUD10702.1 | 2973664 | g48885 | i0 | 62.1 | 1.51271186440678 | 58 | 22 | 73.7 | 0 | 5 | 178 | 238 | 295 | HUD10702.1 sugar phosphate nucleotidyltransferase [Candidatus Saccharimonadales bacterium] | diamond | 357 | 82.8 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadales bacterium | ||||
| 31602134 | 31602134 | PRJNA773778_S_NODE_9756_length_434_cov_10.739612_g9606_i0 | PRJNA773778 | 9756 | 434 | 10.739612 | 46.60991608 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 120 | 3.2399999999999996e-32 | NR | MBB1523567.1 | 2026720 | g9606 | i0 | 65.3 | 0.69815668202765 | 101 | 33 | 69.8 | 1 | 388 | 86 | 23 | 121 | MBB1523567.1 hypothetical protein [Candidatus Saccharibacteria bacterium] | diamond | 303 | 120 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;