RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA773625", tax_clade = "Opisthokonta" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA773625 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1207120 1207120 PRJNA773625_P_NODE_10821_length_162_cov_0.920354_g10806_i0 PRJNA773625 10821 162 0.920354 1.49097348 Opisthokonta 33154 Arthropoda Arthropoda 54.7 0.004   NTclustered gi|2579718323|gb|CP133312.1| 128015 g10806 i0 96.875 0.654320987654321 32 1 20 0 109 140 10831861 10831892 Platynothrus peltifer isolate 155_3 chromosome 7 blastn 106 54.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Sarcoptiformes Camisiidae Platynothrus Platynothrus peltifer
8402485 8402485 PRJNA773625_P_NODE_4587_length_204_cov_1.083871_g4572_i0 PRJNA773625 4587 204 1.083871 2.21109684 Hydrometra stagnorum 446445 Arthropoda Arthropoda 316 5.72e-82   NTclustered gi|1131051030|gb|KX821841.1| 446445 g4572 i0 98.87 1.82843137254902 177 2 87 0 1 177 1416 1240 Hydrometra stagnorum 28S ribosomal RNA gene, partial sequence blastn 373 316 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Hydrometridae Hydrometra Hydrometra stagnorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;