RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where bioproject = "PRJNA773247", tax_phylum = "Euglenozoa" and tax_superkingdom = "Eukaryota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Eukaryota · 12 ✖

tax_phylum 1

  • Euglenozoa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA773247 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2024969 2024969 PRJNA773247_P_NODE_36962_length_214_cov_7.971631_g36878_i0 PRJNA773247 36962 214 7.971631 17.05929034 Euglena gracilis 3039 Euglenozoa other_Eukaryota 124 5.45e-35   NR QLA09571.1 3039 g36878 i0 95.1 3.42056074766355 61 3 85.5 0 212 30 61 121 QLA09571.1 40S small subunit ribosomal protein uS10 [Euglena gracilis] diamond 732 124 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
12686639 12686639 PRJNA773247_P_NODE_26290_length_272_cov_2.763819_g26206_i0 PRJNA773247 26290 272 2.763819 7.51758768 Bodo saltans 75058 Euglenozoa other_Eukaryota 110 1.1e-25   NR CUI15072.1 75058 g26206 i0 60 0.992647058823529 90 36 99.3 0 272 3 510 599 CUI15072.1 mitochondrial ATP-dependent zinc metallopeptidase, putative [Bodo saltans] diamond 270 110 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
19058803 19058803 PRJNA773247_P_NODE_32815_length_245_cov_2.029070_g32731_i0 PRJNA773247 32815 245 2.02907 4.9712215 Leishmania 5658 Euglenozoa other_Eukaryota 52.8 0.022   NTclustered gi|398023294|ref|XM_003864761.1| 5661 g32731 i0 100 0.395918367346939 28 0 11 0 22 49 7646 7619 Leishmania donovani hypothetical protein, conserved (LDBPK_352300), partial mRNA blastn 97 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania donovani
27147725 27147725 PRJNA773247_P_NODE_24302_length_285_cov_2.985849_g24218_i0 PRJNA773247 24302 285 2.985849 8.50966965 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 86.7 2.27e-17   NR XP_028885427.1 67003 g24218 i0 50 4.27368421052632 82 41 86.3 0 18 263 579 660 XP_028885427.1 U3 small nucleolar RNA-associated protein 21 [Trypanosoma theileri] diamond 1218 86.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
27401116 27401116 PRJNA773247_P_NODE_35823_length_233_cov_3.225000_g35739_i0 PRJNA773247 35823 233 3.225 7.51425 Bodo saltans 75058 Euglenozoa other_Eukaryota 100 9.95e-23   NR CUG90904.1 75058 g35739 i0 73.6 0.927038626609442 72 19 92.7 0 7 222 169 240 CUG90904.1 Hypothetical protein, putative [Bodo saltans] diamond 216 100 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
27622139 27622139 PRJNA773247_P_NODE_21344_length_308_cov_2.982979_g21260_i0 PRJNA773247 21344 308 2.982979 9.18757532 Angomonas deanei 59799 Euglenozoa other_Eukaryota 72.4 2.73e-12   NR CAD2213595.1 59799 g21260 i0 53 2.42532467532468 83 29 76 4 307 74 264 341 CAD2213595.1 Protein kinase domain/Protein tyrosine kinase/RIO1 family, putative [Angomonas deanei] diamond 747 72.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Angomonas Angomonas deanei
28695696 28695696 PRJNA773247_P_NODE_19247_length_328_cov_20.478431_g19163_i0 PRJNA773247 19247 328 20.478431 67.16925368 Euglena gracilis 3039 Euglenozoa other_Eukaryota 165 4.95e-50   NR QLA09632.1 3039 g19163 i0 80 0.914634146341463 100 20 91.5 0 327 28 52 151 QLA09632.1 60S large subunit ribosomal protein eL31 [Euglena gracilis] diamond 300 165 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
29074604 29074604 PRJNA773247_P_NODE_20448_length_316_cov_6.436214_g20364_i0 PRJNA773247 20448 316 6.436214 20.33843624 Bodo saltans 75058 Euglenozoa other_Eukaryota 64.3 2.2e-9   NR CUG21308.1 75058 g20364 i0 39.4 1.03481012658228 109 50 97.8 4 6 314 2 100 CUG21308.1 peptidase, putative [Bodo saltans] diamond 327 64.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30189174 30189174 PRJNA773247_P_NODE_31252_length_249_cov_0.875000_g31168_i0 PRJNA773247 31252 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 43.1 0.0314   NR CUG86718.1 75058 g31168 i0 54.1 1.20481927710843 37 17 44.6 0 10 120 4496 4532 CUG86718.1 Hypothetical protein, putative [Bodo saltans] diamond 300 43.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30789545 30789545 PRJNA773247_P_NODE_29654_length_253_cov_6.611111_g29570_i0 PRJNA773247 29654 253 6.611111 16.72611083 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 80.1 3.07e-15   NR XP_001685456.1 347515 g29570 i0 51.3 6.72332015810277 76 36 90.1 1 23 250 698 772 XP_001685456.1 putative DEAD/DEAH box helicase-like protein [Leishmania major strain Friedlin] diamond 1701 80.9 0.990111248454882 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania major
30843310 30843310 PRJNA773247_P_NODE_22274_length_300_cov_6.806167_g22190_i0 PRJNA773247 22274 300 6.806167 20.418501 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 143 3.5599999999999997e-37   NR KAJ9459919.1 91374 g22190 i0 75.3 0.97 97 24 97 0 1 291 243 339 KAJ9459919.1 Kinesin-related protein 3 [Diplonema papillatum] diamond 291 143 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
31199868 31199868 PRJNA773247_P_NODE_35315_length_238_cov_2.763636_g35231_i0 PRJNA773247 35315 238 2.763636 6.57745368 Trypanosoma 5690 Euglenozoa other_Eukaryota 48.9 2.25e-4   NR XP_028886092.1 67003 g35231 i0 39.2 1.5 51 31 64.3 0 1 153 185 235 XP_028886092.1 uncharacterized protein TM35_000042400 [Trypanosoma theileri] diamond 357 49.3 0.991886409736308 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;