RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA773247" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA773247 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27874543 27874543 PRJNA773247_P_NODE_14105_length_399_cov_3.852761_g14021_i0 PRJNA773247 14105 399 3.852761 15.37251639 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 148 4.469999999999999e-43   NR MBI2468313.1 2053607 g14021 i0 69.6 2.5112781954887202 112 34 84.2 0 347 12 4 115 MBI2468313.1 PIN domain-containing protein [Candidatus Rokuibacteriota bacterium] diamond 1002 148 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28042083 28042083 PRJNA773247_P_NODE_37345_length_200_cov_6.165354_g37261_i0 PRJNA773247 37345 200 6.165354 12.330708 Bacteria 2 Bacteria Bacteria 120 6.13e-31   NR PYM90045.1 2053607 g37261 i0 83.3 7.92 66 11 99 0 2 199 163 228 PYM90045.1 MAG: hypothetical protein DME04_24445 [Candidatus Rokuibacteriota bacterium] diamond 1584 120 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28695718 28695718 PRJNA773247_P_NODE_29167_length_256_cov_2.448087_g29083_i0 PRJNA773247 29167 256 2.448087 6.26710272 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 59.3 3.25e-9   NR MBM4442563.1 2053607 g29083 i0 43.3 1.5703125 67 38 78.5 0 256 56 9 75 MBM4442563.1 hypothetical protein [Candidatus Rokuibacteriota bacterium] diamond 402 59.3 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
29043035 29043035 PRJNA773247_P_NODE_28228_length_261_cov_2.867021_g28144_i0 PRJNA773247 28228 261 2.867021 7.48292481 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 48.9 3.13e-4   NR HAM59345.1 2053607 g28144 i0 39.1 0.735632183908046 64 36 72.4 2 261 73 414 475 HAM59345.1 hypothetical protein [Candidatus Rokuibacteriota bacterium] diamond 192 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;