RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

20 rows where bioproject = "PRJNA773247" and tax_phylum = "Candidatus Parcubacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 20 ✖

tax_clade 1

bioproject 1

  • PRJNA773247 · 20 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2024622 2024622 PRJNA773247_P_NODE_12662_length_428_cov_3.191549_g12579_i0 PRJNA773247 12662 428 3.191549 13.65982972 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 227 1.2499999999999998e-69   NR MFM2381580.1 2762014 g12579 i0 82 1.76635514018692 128 23 89.7 0 401 18 1 128 MFM2381580.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 756 227 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
3300071 3300071 PRJNA773247_P_NODE_26923_length_268_cov_5.025641_g26839_i0 PRJNA773247 26923 268 5.025641 13.46871788 Parcubacteria bacterium C7867- 2762014 Bacteria Bacteria 151 2.8199999999999998e-40   NR KND47494.1 1659198 g26839 i0 96.1 3.40298507462687 76 3 85.1 0 1 228 856 931 KND47494.1 MAG: ribonucleoside-diphosphate reductase alpha chain [Parcubacteria bacterium C7867-004] diamond 912 151 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-004
13502658 13502658 PRJNA773247_P_NODE_29091_length_256_cov_8.819672_g29007_i0 PRJNA773247 29091 256 8.819672 22.57836032 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 125 5.57e-34   NR MEN9389615.1 2762014 g29007 i0 70.4 0.94921875 81 24 94.9 0 255 13 21 101 MEN9389615.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 243 125 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
27084967 27084967 PRJNA773247_P_NODE_12882_length_423_cov_4.088571_g12799_i0 PRJNA773247 12882 423 4.088571 17.29465533 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 120 1.2399999999999998e-29   NR MCK4553877.1 2762014 g12799 i0 45.1 0.943262411347518 133 71 94.3 1 20 418 203 333 MCK4553877.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 399 120 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
27969270 27969270 PRJNA773247_P_NODE_14725_length_388_cov_11.482540_g14641_i0 PRJNA773247 14725 388 11.48254 44.5522552 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 97.4 4.4699999999999996e-23   NR RMD52397.1 2762014 g14641 i0 55.1 1.13659793814433 78 35 60.3 0 241 8 1 78 RMD52397.1 MAG: hypothetical protein D6827_00085 [Candidatus Parcubacteria bacterium] diamond 441 97.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28853189 28853189 PRJNA773247_P_NODE_21448_length_307_cov_2.948718_g21364_i0 PRJNA773247 21448 307 2.948718 9.05256426 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 190 1.8899999999999996e-55   NR MEN9920465.1 2762014 g21364 i0 94.9 2.87296416938111 98 5 95.8 0 12 305 46 143 MEN9920465.1 ATP-dependent helicase RecG, ATP-dependent helicase RecG [Candidatus Parcubacteria bacterium] diamond 882 190 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28948370 28948370 PRJNA773247_P_NODE_34768_length_241_cov_1.375000_g34684_i0 PRJNA773247 34768 241 1.375 3.31375 Parcubacteria bacterium C7867- 2762014 Bacteria Bacteria 73.2 5.63e-14   NR KND51714.1 1659195 g34684 i0 80.5 0.510373443983402 41 8 51 0 1 123 129 169 KND51714.1 MAG: hypothetical protein ABA06_00440 [Parcubacteria bacterium C7867-001] diamond 123 73.2 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-001
29232422 29232422 PRJNA773247_P_NODE_8809_length_540_cov_48.443255_g8726_i0 PRJNA773247 8809 540 48.443255 261.593577 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 153 5.91e-45   NR MCR4276078.1 2762014 g8726 i0 81.6 1.45 87 16 48.3 0 47 307 5 91 MCR4276078.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 783 153 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29263665 29263665 PRJNA773247_P_NODE_21009_length_311_cov_3.042017_g20925_i0 PRJNA773247 21009 311 3.042017 9.46067287 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 97.1 3.52e-21   NR MCK4553875.1 2762014 g20925 i0 58 0.781350482315113 81 25 78.1 1 1 243 309 380 MCK4553875.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 243 97.1 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29295411 29295411 PRJNA773247_P_NODE_23669_length_289_cov_9.277778_g23585_i0 PRJNA773247 23669 289 9.277778 26.81277842 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 79.7 5.47e-15   NR RJQ33916.1 2762014 g23585 i0 50.5 1.94117647058824 91 44 94.5 1 280 8 69 158 RJQ33916.1 MAG: hypothetical protein C4556_03635 [Candidatus Parcubacteria bacterium] diamond 561 79.7 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29484580 29484580 PRJNA773247_P_NODE_18170_length_340_cov_7.247191_g18086_i0 PRJNA773247 18170 340 7.247191 24.6404494 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 85.1 2.78e-18   NR NNM83975.1 2762014 g18086 i0 93.9 0.864705882352941 49 3 43.2 0 339 193 103 151 NNM83975.1 GatB/YqeY domain-containing protein [Candidatus Parcubacteria bacterium] diamond 294 85.1 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29674007 29674007 PRJNA773247_P_NODE_32370_length_246_cov_1.907514_g32286_i0 PRJNA773247 32370 246 1.907514 4.69248444 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 91.7 1.48e-20   NR MFM2383881.1 2762014 g32286 i0 58.9 0.890243902439024 73 30 89 0 27 245 6 78 MFM2383881.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 219 91.7 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30021883 30021883 PRJNA773247_P_NODE_12171_length_438_cov_4.254795_g12088_i0 PRJNA773247 12171 438 4.254795 18.6360021 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 90.5 1.69e-19   NR MEN9852156.1 2762014 g12088 i0 39.3 1.02739726027397 150 66 95.9 5 437 18 54 188 MEN9852156.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 450 90.5 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30432836 30432836 PRJNA773247_P_NODE_23693_length_289_cov_4.342593_g23609_i0 PRJNA773247 23693 289 4.342593 12.55009377 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 65.9 3.35e-10   NR MDB5239238.1 2762014 g23609 i0 58.5 0.674740484429066 65 26 66.4 1 13 204 239 303 MDB5239238.1 internalization-like protein competence protein ComEC/Rec2, competence protein ComEC protein [Candidatus Parcubacteria bacterium] diamond 195 65.9 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30558611 30558611 PRJNA773247_P_NODE_11093_length_466_cov_2.071247_g11010_i0 PRJNA773247 11093 466 2.071247 9.65201102 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 221 3.3199999999999993e-68   NR MEN9920714.1 2762014 g11010 i0 71.9 1.96995708154506 153 43 98.5 0 6 464 185 337 MEN9920714.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 918 221 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
31033069 31033069 PRJNA773247_P_NODE_16395_length_362_cov_5.816609_g16311_i0 PRJNA773247 16395 362 5.816609 21.05612458 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 150 3.38e-39   NR MFM2415257.1 2762014 g16311 i0 64.7 0.986187845303867 119 42 98.6 0 5 361 377 495 MFM2415257.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 357 150 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
31380656 31380656 PRJNA773247_P_NODE_12196_length_437_cov_23.239011_g12113_i0 PRJNA773247 12196 437 23.239011 101.55447807 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 163 5.429999999999999e-46   NR MEN9621818.1 2762014 g12113 i0 81.9 1.441647597254 105 19 72.1 0 332 18 1 105 MEN9621818.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 630 163 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32234945 32234945 PRJNA773247_P_NODE_14738_length_388_cov_6.641270_g14654_i0 PRJNA773247 14738 388 6.64127 25.7681276 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 184 3.8299999999999994e-57   NR MEN9647670.1 2762014 g14654 i0 94.9 0.765463917525773 99 5 76.5 0 388 92 41 139 MEN9647670.1 ribosomal protein [Candidatus Parcubacteria bacterium] diamond 297 184 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32339326 32339326 PRJNA773247_P_NODE_10859_length_472_cov_4.100251_g10776_i0 PRJNA773247 10859 472 4.100251 19.35318472 Bacillati 1783272 Bacteria Bacteria 62 5.46e-8   NR MBX4215805.1 2762014 g10776 i0 61.5 0.559322033898305 39 15 24.8 0 119 3 23 61 MBX4215805.1 HK97 family phage prohead protease [Candidatus Parcubacteria bacterium] diamond 264 62.4 0.993589743589744 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32592231 32592231 PRJNA773247_P_NODE_17899_length_344_cov_1.487085_g17815_i0 PRJNA773247 17899 344 1.487085 5.1155724 Bacteria 2 Bacteria Bacteria 154 5.959999999999999e-46   NR KND49725.1 1659202 g17815 i0 90.4 7.27325581395349 83 8 72.4 0 96 344 1 83 KND49725.1 MAG: cold-inducible RNA-binding protein [Parcubacteria bacterium C7867-008] diamond 2502 154 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-008

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;