RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA773247" and tax_phylum = "Candidatus Margulisiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Margulisiibacteriota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA773247 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17327329 17327329 PRJNA773247_P_NODE_32854_length_245_cov_1.662791_g32770_i0 PRJNA773247 32854 245 1.662791 4.07383795 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 125 3.01e-33   NR HVO22863.1 2053573 g32770 i0 69.2 1.9469387755102 78 24 95.5 0 244 11 164 241 HVO22863.1 LLM class F420-dependent oxidoreductase [Candidatus Margulisiibacteriota bacterium] diamond 477 125 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium
28411455 28411455 PRJNA773247_P_NODE_16706_length_358_cov_3.150877_g16622_i0 PRJNA773247 16706 358 3.150877 11.28013966 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 51.2 1.02e-5   NR MDD4527765.1 2053573 g16622 i0 50.9 0.477653631284916 57 24 47.8 3 179 9 1 53 MDD4527765.1 hypothetical protein [Candidatus Margulisiibacteriota bacterium] diamond 171 51.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium
30599856 30599856 PRJNA773247_P_NODE_36773_length_221_cov_7.932432_g36689_i0 PRJNA773247 36773 221 7.932432 17.53067472 Bacteria 2 Bacteria Bacteria 74.3 2.03e-13   NR MFA6418385.1 2053573 g36689 i0 56.9 4.39819004524887 65 28 88.2 0 206 12 204 268 MFA6418385.1 hypothetical protein [Candidatus Margulisiibacteriota bacterium] diamond 972 74.7 0.994645247657296 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;