RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA773247" and tax_phylum = "Candidatus Hydrogenedentota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA773247 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27274639 27274639 PRJNA773247_P_NODE_33323_length_244_cov_1.520468_g33239_i0 PRJNA773247 33323 244 1.520468 3.70994192 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 107 1.7300000000000003e-27   NR HOV76282.1 2030809 g33239 i0 81.2 0.848360655737705 69 13 84.8 0 209 3 1 69 HOV76282.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 207 107 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
27306299 27306299 PRJNA773247_P_NODE_17663_length_347_cov_1.010949_g17579_i0 PRJNA773247 17663 347 1.010949 3.50799303 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 213 2.07e-65   NR MFM1921254.1 2030809 g17579 i0 89.6 0.994236311239193 115 12 99.4 0 1 345 119 233 MFM1921254.1 type pilus inner membrane protein PilC [Candidatus Hydrogenedentota bacterium] diamond 345 213 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28127290 28127290 PRJNA773247_P_NODE_26905_length_268_cov_8.056410_g26821_i0 PRJNA773247 26905 268 8.05641 21.5911788 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 92 4.2e-20   NR HRT22335.1 2030809 g26821 i0 67.2 0.75 67 22 75 0 205 5 1 67 HRT22335.1 DUF935 family protein [Candidatus Hydrogenedentota bacterium] diamond 201 92 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28758628 28758628 PRJNA773247_P_NODE_37067_length_210_cov_6.474453_g36983_i0 PRJNA773247 37067 210 6.474453 13.5963513 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 57 1.24e-7   NR MCH7910968.1 2030809 g36983 i0 41.2 0.971428571428571 68 40 97.1 0 206 3 78 145 MCH7910968.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 204 57 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28894368 28894368 PRJNA773247_P_NODE_24848_length_281_cov_6.269231_g24764_i0 PRJNA773247 24848 281 6.2692310000000004 17.61653911 Pseudomonadati 3379134 Bacteria Bacteria 72.4 1.23e-12   NR MBP7430721.1 2030809 g24764 i0 62.3 1.13167259786477 53 20 56.6 0 163 5 1 53 MBP7430721.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 318 72.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31285534 31285534 PRJNA773247_P_NODE_29495_length_254_cov_2.977901_g29411_i0 PRJNA773247 29495 254 2.977901 7.56386854 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 49.7 1.51e-4   NR HOZ49557.1 2030809 g29411 i0 36.9 0.992125984251969 84 47 99.2 2 2 253 9 86 HOZ49557.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 252 49.7 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;