RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA773247", tax_phylum = "Candidatus Bathyarchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 4 ✖

tax_phylum 1

  • Candidatus Bathyarchaeota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA773247 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28379780 28379780 PRJNA773247_P_NODE_34186_length_242_cov_2.372781_g34102_i0 PRJNA773247 34186 242 2.372781 5.74213002 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 63.5 1.6e-9   NR HVP49876.1 3045160 g34102 i0 45.1 0.880165289256198 71 38 88 1 239 27 200 269 HVP49876.1 hypothetical protein [Candidatus Bathyarchaeia archaeon] diamond 213 63.5 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
29295395 29295395 PRJNA773247_P_NODE_16009_length_368_cov_7.301695_g15925_i0 PRJNA773247 16009 368 7.301695 26.8702376 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 84.7 2.92e-17   NR HVP49670.1 3045160 g15925 i0 47.8 1.50815217391304 92 48 75 0 316 41 1 92 HVP49670.1 ERF family protein [Candidatus Bathyarchaeia archaeon] diamond 555 84.7 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
30369749 30369749 PRJNA773247_P_NODE_22032_length_302_cov_5.807860_g21948_i0 PRJNA773247 22032 302 5.80786 17.5397372 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 53.1 1.7e-5   NR MDH5686275.1 2026714 g21948 i0 41.6 0.764900662251656 77 42 76.5 1 265 35 438 511 MDH5686275.1 BNR repeat-containing protein [Candidatus Bathyarchaeota archaeon] diamond 231 53.1 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
32592232 32592232 PRJNA773247_P_NODE_18839_length_333_cov_2.834615_g18755_i0 PRJNA773247 18839 333 2.834615 9.43926795 root 1 Root_unresolved Root_unresolved 47 0.00333   NR MCW4020730.1 2026714 g18755 i0 35.2 1.63963963963964 91 55 82 1 26 298 340 426 MCW4020730.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 546 47 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;