RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA773247" and tax_phylum = "Balneolota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Balneolota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA773247 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29137838 29137838 PRJNA773247_P_NODE_36229_length_229_cov_4.743590_g36145_i0 PRJNA773247 36229 229 4.74359 10.8628211 Gracilimonas tropica 454600 Bacteria Bacteria 49.3 1.55e-4   NR WP_020403239.1 454600 g36145 i0 46.5 1.12663755458515 43 23 56.3 0 226 98 560 602 WP_020403239.1 serine/threonine-protein kinase [Gracilimonas tropica] diamond 258 49.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Gracilimonas Gracilimonas tropica
30653494 30653494 PRJNA773247_P_NODE_8273_length_564_cov_9.562118_g8190_i0 PRJNA773247 8273 564 9.562118 53.93034552 Balneolaceae bacterium 2053516 Bacteria Bacteria 127 6.68e-34   NR HBX65816.1 2053516 g8190 i0 59 0.531914893617021 100 41 53.2 0 563 264 17 116 HBX65816.1 hypothetical protein [Balneolaceae bacterium] diamond 300 127 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
32771439 32771439 PRJNA773247_P_NODE_3380_length_1041_cov_8.881198_g3318_i0 PRJNA773247 3380 1041 8.881198 92.45327118 Balneolaceae bacterium 2053516 Bacteria Bacteria 80.5 1.19e-12   NR MDX1639814.1 2053516 g3318 i0 46.3 0.236311239193084 82 44 23.6 0 10 255 348 429 MDX1639814.1 KUP/HAK/KT family potassium transporter [Balneolaceae bacterium] diamond 246 80.5 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;