RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA773247", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA773247 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2024860 2024860 PRJNA773247_P_NODE_28662_length_259_cov_1.645161_g28578_i0 PRJNA773247 28662 259 1.645161 4.26096699 Bacteria 2 Bacteria Bacteria 118 6.059999999999999e-32   NR HPK06299.1 1872489 g28578 i0 69.9 8.67567567567568 83 25 96.1 0 3 251 36 118 HPK06299.1 response regulator [Aminivibrio sp.] diamond 2247 119 0.991596638655462 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Aminivibrio Aminivibrio sp.
27779995 27779995 PRJNA773247_P_NODE_16744_length_357_cov_11.408451_g16660_i0 PRJNA773247 16744 357 11.408451 40.72817007 Synergistaceae bacterium 2053624 Bacteria Bacteria 46.2 0.00795   NR MBR0185776.1 2053624 g16660 i0 37.2 2.26890756302521 86 44 70.6 4 326 75 525 602 MBR0185776.1 AAA family ATPase [Synergistaceae bacterium] diamond 810 46.2 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;