RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA773247", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA773247 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29810000 29810000 PRJNA773247_P_NODE_10711_length_476_cov_7.332506_g10628_i0 PRJNA773247 10711 476 7.332506 34.90272856 Metazoa 33208 Platyhelminthes Platyhelminthes 65.1 7.2e-9   NR VDL61534.1 6216 g10628 i0 41.9 6.29621848739496 117 47 67.4 4 55 375 725 830 VDL61534.1 unnamed protein product [Hymenolepis diminuta] diamond 2997 65.5 0.993893129770992 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta
31832688 31832688 PRJNA773247_P_NODE_12697_length_427_cov_5.011299_g12614_i0 PRJNA773247 12697 427 5.011299 21.39824673 Opisthokonta 33154 Platyhelminthes Platyhelminthes 59.7 3.22e-7   NR CAH8628576.1 6188 g12614 i0 41.6 3.45667447306792 77 35 50.6 3 305 90 718 789 CAH8628576.1 unnamed protein product [Schistosoma rodhaini] diamond 1476 59.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma rodhaini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;