RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA773247", tax_kingdom = "Fungi" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 7 ✖

tax_kingdom 1

  • Fungi · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA773247 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18600688 18600688 PRJNA773247_P_NODE_27915_length_263_cov_1.621053_g27831_i0 PRJNA773247 27915 263 1.621053 4.26336939 Fungi 4751 Fungi Fungi 144 4.77e-40   NR KAI8926618.1 281842 g27831 i0 73.6 23.7946768060837 87 23 99.2 0 3 263 194 280 KAI8926618.1 60S ribosomal protein L3, partial [Entophlyctis helioformis] diamond 6258 145 0.993103448275862 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Entophlyctis Entophlyctis helioformis
26936226 26936226 PRJNA773247_P_NODE_24622_length_283_cov_1.942857_g24538_i0 PRJNA773247 24622 283 1.942857 5.49828531 root 1 Root_unresolved Root_unresolved 90.1 1.41e-18   NR XP_052962581.1 110093 g24538 i0 49.4 3.92226148409894 87 44 92.2 0 20 280 1555 1641 XP_052962581.1 uncharacterized protein BJ171DRAFT_249954 [Polychytrium aggregatum] diamond 1110 90.5 0.995580110497237 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
27274652 27274652 PRJNA773247_P_NODE_883_length_2030_cov_14.098109_g866_i0 PRJNA773247 883 2030 14.098109 286.1916127 Spizellomyces punctatus DAOM BR117 645134 Fungi Fungi 571 2.67e-193   NR XP_016604088.1 645134 g866 i0 50.4 2.60098522167488 587 258 85.4 5 41 1774 103 665 XP_016604088.1 hypothetical protein, variant [Spizellomyces punctatus DAOM BR117] diamond 5280 571 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
28474545 28474545 PRJNA773247_P_NODE_17426_length_349_cov_8.083333_g17342_i0 PRJNA773247 17426 349 8.083333 28.21083217 Gorgonomyces haynaldii 382530 Fungi Fungi 129 2.13e-36   NR KAI8903770.1 382530 g17342 i0 66.3 1.50429799426934 89 30 76.5 0 11 277 15 103 KAI8903770.1 thioredoxine 2 [Gorgonomyces haynaldii] diamond 525 129 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Gorgonomycetaceae Gorgonomyces Gorgonomyces haynaldii
30338142 30338142 PRJNA773247_P_NODE_19932_length_321_cov_7.064516_g19848_i0 PRJNA773247 19932 321 7.064516 22.67709636 Hyaloraphidium curvatum 82268 Fungi Fungi 82 3.13e-16   NR KAI9030377.1 82268 g19848 i0 44.8 0.813084112149533 87 47 81.3 1 262 2 48 133 KAI9030377.1 beta-lactamase-like protein [Hyaloraphidium curvatum] diamond 261 82 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
31696854 31696854 PRJNA773247_P_NODE_8397_length_558_cov_13.940206_g8314_i0 PRJNA773247 8397 558 13.940206 77.78634948 Chytriomyces sp. MP71 1882861 Fungi Fungi 132 6.85e-36   NR KAI8616905.1 1882861 g8314 i0 51.6 8.3494623655914 128 62 68.8 0 508 125 7 134 KAI8616905.1 ribosomal protein L14-domain-containing protein [Chytriomyces sp. MP71] diamond 4659 132 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces sp. MP71
32329922 32329922 PRJNA773247_P_NODE_28459_length_260_cov_1.866310_g28375_i0 PRJNA773247 28459 260 1.86631 4.852406 Quaeritorhiza haematococci 2654861 Fungi Fungi 45.8 0.0024   NR KAJ3085310.1 2654861 g28375 i0 44.7 0.542307692307692 47 26 54.2 0 1 141 64 110 KAJ3085310.1 hypothetical protein HK102_000123 [Quaeritorhiza haematococci] diamond 141 45.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes   Quaeritorhizaceae Quaeritorhiza Quaeritorhiza haematococci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;