contig_metadata
5 rows where bioproject = "PRJNA773247", tax_clade = "core chlorophytes" and tax_phylum = "Chlorophyta"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7127465 | 7127465 | PRJNA773247_P_NODE_15186_length_381_cov_3.288961_g15102_i0 | PRJNA773247 | 15186 | 381 | 3.288961 | 12.53094141 | Eukaryota | 2759 | Plants | Plants | 167 | 1.08e-46 | NR | PNG99282.1 | 47790 | g15102 | i0 | 68.7 | 13.6062992125984 | 115 | 36 | 90.6 | 0 | 8 | 352 | 57 | 171 | PNG99282.1 Midasin, partial [Tetrabaena socialis] | diamond | 5184 | 167 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Tetrabaenaceae | Tetrabaena | Tetrabaena socialis | |
| 21151612 | 21151612 | PRJNA773247_P_NODE_36997_length_213_cov_4.685714_g36913_i0 | PRJNA773247 | 36997 | 213 | 4.685714 | 9.98057082 | Ulothrix zonata | 43941 | Plants | Plants | 385 | 1.63e-102 | NTclustered | gi|530445638|emb|HE860517.1| | 43941 | g36913 | i0 | 100 | 95.3990610328639 | 208 | 0 | 98 | 0 | 5 | 212 | 131 | 338 | Ulothrix zonata genomic DNA containing ITS2, isolate N94, specimen voucher WELT:A032275 | blastn | 20320 | 385 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ulotrichales | Ulotrichaceae | Ulothrix | Ulothrix zonata | |
| 30568109 | 30568109 | PRJNA773247_P_NODE_7753_length_590_cov_2.765957_g7670_i0 | PRJNA773247 | 7753 | 590 | 2.7659570000000002 | 16.3191463 | Trebouxia | 13786 | Plants | Plants | 70.5 | 2.61e-10 | NR | KAA6428502.1 | 2608996 | g7670 | i0 | 62.1 | 2.03389830508475 | 58 | 14 | 25.4 | 1 | 581 | 432 | 480 | 537 | KAA6428502.1 MAG: CMGC SRPK kinase [Trebouxia sp. A1-2] | diamond | 1200 | 70.5 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia sp. A1-2 | |
| 30621934 | 30621934 | PRJNA773247_P_NODE_36793_length_221_cov_4.243243_g36709_i0 | PRJNA773247 | 36793 | 221 | 4.243243 | 9.37756703 | Monoraphidium minutum | 39955 | Plants | Plants | 82.8 | 2.17e-16 | NR | KAI8472156.1 | 39955 | g36709 | i0 | 92 | 0.678733031674208 | 50 | 4 | 67.9 | 0 | 72 | 221 | 406 | 455 | KAI8472156.1 MAG: Sodium/hydrogen exchanger family-domain-containing protein [Monoraphidium minutum] | diamond | 150 | 82.8 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium minutum | |
| 31485154 | 31485154 | PRJNA773247_P_NODE_14676_length_389_cov_4.136076_g14592_i0 | PRJNA773247 | 14676 | 389 | 4.136076 | 16.08933564 | Eukaryota | 2759 | Plants | Plants | 170 | 5.08e-46 | NR | KAL4853875.1 | 3077 | g14592 | i0 | 66.4 | 22.7043701799486 | 128 | 43 | 98.7 | 0 | 388 | 5 | 681 | 808 | KAL4853875.1 Prolycopene isomerase [Chlorella vulgaris] | diamond | 8832 | 171 | 0.994152046783626 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella vulgaris |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;