RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA773247", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA773247 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10953044 10953044 PRJNA773247_P_NODE_29689_length_253_cov_3.483333_g29605_i0 PRJNA773247 29689 253 3.483333 8.81283249 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 111 3.1200000000000003e-27   NR KAF4720945.1 32597 g29605 i0 64.9 6.37944664031621 77 27 91.3 0 251 21 217 293 KAF4720945.1 hypothetical protein FOZ62_001383, partial [Perkinsus olseni] diamond 1614 112 0.991071428571429 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27717136 27717136 PRJNA773247_P_NODE_20284_length_318_cov_1.730612_g20200_i0 PRJNA773247 20284 318 1.730612 5.50334616 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 79 8.33e-15   NR KAF4674125.1 330153 g20200 i0 44.1 3.50943396226415 93 52 87.7 0 279 1 208 300 KAF4674125.1 hypothetical protein FOL47_009662 [Perkinsus chesapeaki] diamond 1116 79 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;