RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA773247", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA773247 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22425984 22425984 PRJNA773247_P_NODE_1098_length_1846_cov_3.467005_g1074_i0 PRJNA773247 1098 1846 3.467005 64.0009123 Paulinella 39716 SAR_Eukaryotes SAR_Eukaryotes 594 6.039999999999999e-206   NR BAJ14650.1 39717 g1074 i0 79.1 1.82015167930661 369 76 60 1 88 1194 66 433 BAJ14650.1 elongation factor 1alpha, partial [Paulinella chromatophora] diamond 3360 600 0.99 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
32234985 32234985 PRJNA773247_P_NODE_3538_length_1009_cov_55.605769_g3476_i0 PRJNA773247 3538 1009 55.605769 561.06220921 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 60.8 7.06e-7   NR MES1910830.1 1215613 g3476 i0 32.6 0.538156590683845 181 99 47.3 9 928 452 5 184 MES1910830.1 hypothetical protein [Cercozoa sp. M6MM] diamond 543 60.8 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;