RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA773247", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA773247 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29905054 29905054 PRJNA773247_P_NODE_8291_length_563_cov_12.683673_g8208_i0 PRJNA773247 8291 563 12.683673 71.40907899 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 147 3.74e-37   NR KAF7456639.1 83540 g8208 i0 41.5 9 188 96 99.6 3 561 1 450 624 KAF7456639.1 putative sortilin [Cryptosporidium felis] diamond 5067 147 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
32519678 32519678 PRJNA773247_P_NODE_22879_length_295_cov_4.387387_g22795_i0 PRJNA773247 22879 295 4.387387 12.94279165 Neospora caninum Liverpool 572307 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.0201   NR CEL69550.1 572307 g22795 i0 36.1 0.84406779661017 83 46 84.4 1 260 12 303 378 CEL69550.1 TPA: hypothetical protein BN1204_052570 [Neospora caninum Liverpool] diamond 249 44.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;