RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA773247", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 9 ✖

tax_clade 1

  • Amoebozoa · 9 ✖

bioproject 1

  • PRJNA773247 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3299987 3299987 PRJNA773247_P_NODE_20843_length_313_cov_1.416667_g20759_i0 PRJNA773247 20843 313 1.416667 4.43416771 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 183 5.2e-55   NR XP_004338972.1 1257118 g20759 i0 85.4 3.9776357827476 103 15 98.7 0 310 2 4 106 XP_004338972.1 adenine nucleotide translocator, putative [Acanthamoeba castellanii str. Neff] diamond 1245 183 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17327055 17327055 PRJNA773247_P_NODE_13454_length_411_cov_9.056213_g13370_i0 PRJNA773247 13454 411 9.056213 37.22103543 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 568 3.169999999999999e-157   NTclustered gi|470440055|ref|XM_004339209.1| 1257118 g13370 i0 96.522 0.839416058394161 345 9 83 1 65 406 696 352 Acanthamoeba castellanii str. Neff EF hand domain containing protein (ACA1_059510), partial mRNA blastn 345 568 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20333543 20333543 PRJNA773247_P_NODE_35956_length_232_cov_2.836478_g35872_i0 PRJNA773247 35956 232 2.836478 6.58062896 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 131 9.349999999999999e-35   NR XP_004334670.1 1257118 g35872 i0 80.5 1.96551724137931 77 15 99.6 0 1 231 10 86 XP_004334670.1 ATP:L-methionine S-Adenosyltransferase [Acanthamoeba castellanii str. Neff] diamond 456 131 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27590656 27590656 PRJNA773247_P_NODE_30424_length_251_cov_0.865169_g30340_i0 PRJNA773247 30424 251 0.865169 2.17157419 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 120 9.55e-31   NR XP_004333334.1 1257118 g30340 i0 67.5 0.99203187250996006 83 27 99.2 0 1 249 250 332 XP_004333334.1 Synapsin, ATP binding domain containing protein [Acanthamoeba castellanii str. Neff] diamond 249 120 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28379782 28379782 PRJNA773247_P_NODE_35566_length_235_cov_5.154321_g35482_i0 PRJNA773247 35566 235 5.154321 12.11265435 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 55.8 8.21e-7   NR XP_004340974.1 1257118 g35482 i0 32.9 2.85957446808511 70 47 89.4 0 223 14 587 656 XP_004340974.1 protein kinase domain containing protein [Acanthamoeba castellanii str. Neff] diamond 672 55.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28600903 28600903 PRJNA773247_P_NODE_13527_length_410_cov_1.890208_g13443_i0 PRJNA773247 13527 410 1.890208 7.7498528 Paramoeba perurans 437603 Discosea other_Eukaryota 100 1.91e-21   NR QWE91383.1 437603 g13443 i0 41.4 0.936585365853659 128 66 93.7 2 5 388 334 452 QWE91383.1 hypothetical protein [Paramoeba perurans] diamond 384 100 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
28673548 28673548 PRJNA773247_P_NODE_8467_length_555_cov_12.056017_g8384_i0 PRJNA773247 8467 555 12.056017 66.91089435 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 58.9 1.56e-6   NR XP_004345953.1 1257118 g8384 i0 32.4 2.4 148 92 78.9 4 517 80 236 377 XP_004345953.1 uncharacterized protein ACA1_183430 [Acanthamoeba castellanii str. Neff] diamond 1332 59.3 0.993254637436762 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30969769 30969769 PRJNA773247_P_NODE_26014_length_274_cov_1.313433_g25930_i0 PRJNA773247 26014 274 1.313433 3.59880642 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 99.4 6.89e-22   NR XP_004341947.1 1257118 g25930 i0 65 1.82846715328467 80 25 87.6 2 271 32 94 170 XP_004341947.1 gelation factor, putative [Acanthamoeba castellanii str. Neff] diamond 501 99.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31412190 31412190 PRJNA773247_P_NODE_24736_length_282_cov_2.650718_g24652_i0 PRJNA773247 24736 282 2.650718 7.47502476 Paramoeba perurans 437603 Discosea other_Eukaryota 92.8 1.44e-19   NR QWE91383.1 437603 g24652 i0 47.3 0.98936170212766 93 46 98.9 1 3 281 387 476 QWE91383.1 hypothetical protein [Paramoeba perurans] diamond 279 92.8 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;