RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA772154" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA772154 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29232361 29232361 PRJNA772154_P_NODE_2929_length_816_cov_1.958277_g2763_i0 PRJNA772154 2929 816 1.958277 15.97954032 Adineta ricciae 249248 Rotifera other_Eukaryota 48.5 0.024   NR CAF0934760.1 249248 g2763 i0 28.4 0.544117647058823 148 84 47.4 6 777 391 634 778 CAF0934760.1 unnamed protein product, partial [Adineta ricciae] diamond 444 48.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
32843926 32843926 PRJNA772154_P_NODE_9100_length_383_cov_1.258065_g8915_i0 PRJNA772154 9100 383 1.258065 4.81838895 Metazoa 33208 Rotifera other_Eukaryota 98.6 2.36e-22   NR CAF0767949.1 104777 g8915 i0 48 9.86945169712794 123 63 95.6 1 16 381 4 126 CAF0767949.1 unnamed protein product [Brachionus calyciflorus] diamond 3780 98.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;