contig_metadata
10 rows where bioproject = "PRJNA772154" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 747370 | 747370 | PRJNA772154_P_NODE_19021_length_250_cov_0.881356_g18836_i0 | PRJNA772154 | 19021 | 250 | 0.881356 | 2.20339 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 165 | 3.07e-45 | NR | MEZ4425688.1 | 2026742 | g18836 | i0 | 91.6 | 0.996 | 83 | 7 | 99.6 | 0 | 1 | 249 | 78 | 160 | MEZ4425688.1 amidohydrolase family protein [Gemmatimonadota bacterium] | diamond | 249 | 165 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 747414 | 747414 | PRJNA772154_P_NODE_20781_length_246_cov_0.901734_g20596_i0 | PRJNA772154 | 20781 | 246 | 0.901734 | 2.21826564 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 261 | 3.39e-65 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g20596 | i0 | 86.179 | 82.5528455284553 | 246 | 29 | 99 | 5 | 1 | 244 | 3042802 | 3042560 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 20308 | 261 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 27527228 | 27527228 | PRJNA772154_P_NODE_18263_length_252_cov_0.871508_g18078_i0 | PRJNA772154 | 18263 | 252 | 0.871508 | 2.19620016 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 97.4 | 3.39e-22 | NR | HKC39232.1 | 2448054 | g18078 | i0 | 61 | 0.976190476190476 | 82 | 32 | 97.6 | 0 | 252 | 7 | 206 | 287 | HKC39232.1 DcaP family trimeric outer membrane transporter [Gemmatimonadales bacterium] | diamond | 246 | 97.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 28632569 | 28632569 | PRJNA772154_P_NODE_18907_length_250_cov_0.881356_g18722_i0 | PRJNA772154 | 18907 | 250 | 0.881356 | 2.20339 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 170 | 1.04e-50 | NR | MCA9722350.1 | 2026742 | g18722 | i0 | 96.3 | 0.984 | 82 | 3 | 98.4 | 0 | 247 | 2 | 189 | 270 | MCA9722350.1 ribosome small subunit-dependent GTPase A [Gemmatimonadota bacterium] | diamond | 246 | 170 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 28916277 | 28916277 | PRJNA772154_P_NODE_21408_length_245_cov_0.906977_g21223_i0 | PRJNA772154 | 21408 | 245 | 0.906977 | 2.22209365 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 79 | 6.8e-15 | NR | MFN8580229.1 | 2026741 | g21223 | i0 | 52.6 | 1.91020408163265 | 78 | 35 | 94.3 | 2 | 8 | 238 | 65 | 141 | MFN8580229.1 EAL domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 468 | 79 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30021870 | 30021870 | PRJNA772154_P_NODE_20851_length_246_cov_0.901734_g20666_i0 | PRJNA772154 | 20851 | 246 | 0.901734 | 2.21826564 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 119 | 6.18e-30 | NR | MCA9720879.1 | 2026742 | g20666 | i0 | 100 | 0.695121951219512 | 57 | 0 | 69.5 | 0 | 1 | 171 | 317 | 373 | MCA9720879.1 beta-lactamase family protein [Gemmatimonadota bacterium] | diamond | 171 | 119 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30969740 | 30969740 | PRJNA772154_P_NODE_19114_length_250_cov_0.881356_g18929_i0 | PRJNA772154 | 19114 | 250 | 0.881356 | 2.20339 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 154 | 2.43e-41 | NR | MCA9738377.1 | 2026742 | g18929 | i0 | 95.2 | 0.996 | 83 | 4 | 99.6 | 0 | 249 | 1 | 8 | 90 | MCA9738377.1 HEAT repeat domain-containing protein [Gemmatimonadota bacterium] | diamond | 249 | 154 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 31507222 | 31507222 | PRJNA772154_P_NODE_17996_length_252_cov_0.871508_g17811_i0 | PRJNA772154 | 17996 | 252 | 0.871508 | 2.19620016 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 84 | 6.51e-17 | NR | MBK7908416.1 | 2026742 | g17811 | i0 | 100 | 0.5 | 42 | 0 | 50 | 0 | 251 | 126 | 307 | 348 | MBK7908416.1 Gfo/Idh/MocA family oxidoreductase [Gemmatimonadota bacterium] | diamond | 126 | 84 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 32139780 | 32139780 | PRJNA772154_P_NODE_18978_length_250_cov_0.881356_g18793_i0 | PRJNA772154 | 18978 | 250 | 0.881356 | 2.20339 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 139 | 4.93e-38 | NR | HET9383629.1 | 2448054 | g18793 | i0 | 85.5 | 0.996 | 83 | 12 | 99.6 | 0 | 1 | 249 | 68 | 150 | HET9383629.1 MBL fold metallo-hydrolase [Gemmatimonadales bacterium] | diamond | 249 | 139 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 32234931 | 32234931 | PRJNA772154_P_NODE_19038_length_250_cov_0.881356_g18853_i0 | PRJNA772154 | 19038 | 250 | 0.881356 | 2.20339 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 153 | 3.39e-41 | NR | MCA9738293.1 | 2026742 | g18853 | i0 | 95.2 | 0.996 | 83 | 4 | 99.6 | 0 | 249 | 1 | 656 | 738 | MCA9738293.1 UvrD-helicase domain-containing protein [Gemmatimonadota bacterium] | diamond | 249 | 153 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;