contig_metadata
9 rows where bioproject = "PRJNA772154", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 747379 | 747379 | PRJNA772154_P_NODE_19301_length_249_cov_1.227273_g19116_i0 | PRJNA772154 | 19301 | 249 | 1.227273 | 3.05590977 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 333 | 7.189999999999999e-87 | NTclustered | gi|2893356071|emb|OZ220494.1| | 2053517 | g19116 | i0 | 90.837 | 198.939759036145 | 251 | 20 | 99 | 3 | 2 | 249 | 964520 | 964770 | MAG: Bdellovibrionales bacterium isolate 95f108ca-4012-4f55-a596-77f5f94b2342 genome assembly, chromosome: 1 | blastn | 49536 | 333 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 10135400 | 10135400 | PRJNA772154_P_NODE_20368_length_247_cov_0.896552_g20183_i0 | PRJNA772154 | 20368 | 247 | 0.896552 | 2.21448344 | Bdellovibrio | 958 | Bacteria | Bacteria | 193 | 1.26e-44 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g20183 | i0 | 80.816 | 8.67206477732794 | 245 | 47 | 99 | 0 | 1 | 245 | 835969 | 836213 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 2142 | 193 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 27464247 | 27464247 | PRJNA772154_P_NODE_17703_length_253_cov_0.866667_g17518_i0 | PRJNA772154 | 17703 | 253 | 0.866667 | 2.19266751 | Pseudobdellovibrio sp. | 2862747 | Bacteria | Bacteria | 42.4 | 0.0108 | NR | MCC2678057.1 | 2862747 | g17518 | i0 | 52.2 | 0.545454545454545 | 46 | 22 | 54.5 | 0 | 253 | 116 | 41 | 86 | MCC2678057.1 hypothetical protein [Pseudobdellovibrio sp.] | diamond | 138 | 42.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. | ||
| 28221701 | 28221701 | PRJNA772154_P_NODE_21506_length_245_cov_0.906977_g21321_i0 | PRJNA772154 | 21506 | 245 | 0.906977 | 2.22209365 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 110 | 7.55e-26 | NR | MBL7716941.1 | 2053517 | g21321 | i0 | 58.8 | 0.979591836734694 | 80 | 33 | 98 | 0 | 240 | 1 | 646 | 725 | MBL7716941.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 240 | 110 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28443051 | 28443051 | PRJNA772154_P_NODE_18526_length_251_cov_0.876404_g18341_i0 | PRJNA772154 | 18526 | 251 | 0.876404 | 2.19977404 | Micavibrio sp. | 2024841 | Bacteria | Bacteria | 48.9 | 1.12e-4 | NR | MAE51675.1 | 2024841 | g18341 | i0 | 35.7 | 1.00398406374502 | 84 | 48 | 93.2 | 1 | 16 | 249 | 8 | 91 | MAE51675.1 hypothetical protein [Micavibrio sp.] | diamond | 252 | 48.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio sp. | ||
| 28443052 | 28443052 | PRJNA772154_P_NODE_19066_length_250_cov_0.881356_g18881_i0 | PRJNA772154 | 19066 | 250 | 0.881356 | 2.20339 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 158 | 2.13e-43 | NR | MCH2534402.1 | 2053517 | g18881 | i0 | 97.6 | 0.996 | 83 | 2 | 99.6 | 0 | 250 | 2 | 369 | 451 | MCH2534402.1 chloride channel protein [Bdellovibrionales bacterium] | diamond | 249 | 158 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28957849 | 28957849 | PRJNA772154_P_NODE_22408_length_243_cov_0.917647_g22223_i0 | PRJNA772154 | 22408 | 243 | 0.917647 | 2.22988221 | Bdellovibrio | 958 | Bacteria | Bacteria | 143 | 1.67e-38 | NR | WP_374031657.1 | 959 | g22223 | i0 | 80 | 11.7654320987654 | 80 | 16 | 98.8 | 0 | 241 | 2 | 371 | 450 | WP_374031657.1 metallophosphoesterase [Bdellovibrio bacteriovorus] | diamond | 2859 | 143 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 29200847 | 29200847 | PRJNA772154_P_NODE_18689_length_251_cov_0.876404_g18504_i0 | PRJNA772154 | 18689 | 251 | 0.876404 | 2.19977404 | Bdellovibrio sp. KM | 28201 | Bacteria | Bacteria | 79.7 | 6.63e-17 | NR | WP_181605507.1 | 2748865 | g18504 | i0 | 62.7 | 1.42231075697211 | 59 | 22 | 70.5 | 0 | 3 | 179 | 67 | 125 | WP_181605507.1 hypothetical protein [Bdellovibrio sp. KM01] | diamond | 357 | 79.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. KM01 | ||
| 32802945 | 32802945 | PRJNA772154_P_NODE_21360_length_245_cov_0.906977_g21175_i0 | PRJNA772154 | 21360 | 245 | 0.906977 | 2.22209365 | Bdellovibrionales bacterium GWB1_55_8 | 1797386 | Bacteria | Bacteria | 42.7 | 0.0392 | NR | OFZ22225.1 | 1797386 | g21175 | i0 | 43.9 | 0.502040816326531 | 41 | 23 | 50.2 | 0 | 130 | 8 | 536 | 576 | OFZ22225.1 MAG: hypothetical protein A2X94_01845 [Bdellovibrionales bacterium GWB1_55_8] | diamond | 123 | 42.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium GWB1_55_8 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;